RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZNF830Q96NB3 372 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 HSD3B7Q9H2F3 369 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 SMOXQ9NWM0 555 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 IL17CQ9P0M4 197 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 PTRH2Q9Y3E5 179 aaKnown RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 SPO11Q9Y5K1 396 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 CSAG2Q9Y5P2 127 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 HEBP2Q9Y5Z4 205 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 AP1M2Q9Y6Q5 423 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 H3BMH7 237 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 AGPSO00116 658 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A9O60656 530 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 MT-CYBP00156 380 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 CYP1A2P05177 515 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 SNRPB2P08579 225 aaKnown RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 SLC35G4P0C7Q5 338 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A6P19224 532 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A1P22309 533 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A4P22310 534 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 PBLDP30039 288 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 SPAM1P38567 509 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 SSR1P43307 286 aaKnown RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 LMAN1P49257 510 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 KRTAP10-9P60411 292 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 CYP2A13Q16696 494 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 FNBP1LQ5T0N5 605 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 GPRC6AQ5T6X5 926 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 MLIPQ5VWP3 458 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 FCRL6Q6DN72 434 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 RHBDD2Q6NTF9 364 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 RBM43Q6ZSC3 357 aaKnown RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 PPP1R32Q7Z5V6 425 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 FJX1Q86VR8 437 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 GPR135Q8IZ08 494 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 PROKR1Q8TCW9 393 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 RELTQ969Z4 430 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 LINC00615Q96LM1 132 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 RMDN2Q96LZ7 410 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 GBP5Q96PP8 586 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 RNF157Q96PX1 679 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 TRAPPC9Q96Q05 1148 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 SLX1AQ9BQ83 275 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 AP1M1Q9BXS5 423 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 CHRNA10Q9GZZ6 450 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 THAP2Q9H0W7 228 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 SRMSQ9H3Y6 488 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
NEDD9-211ENST00000508546 GPN3Q9UHW5 284 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-211ENST00000508546 GLYATL1P3A0A0U1RQE8 302 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 LOC285095A0A1B0GVY8 99 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 GSAPA4D1B5 854 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF487B1APH4 448 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 BTN3A1O00481 513 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 GAPDHSO14556 408 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 GPR39O43194 453 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 EPOP01588 193 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CBSLP0DN79 551 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 SKILP12757 684 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 MSH3P20585 1137 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CBSP35520 551 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 DCDP81605 110 aaKnown RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 AP1B1Q10567 949 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 KRT33BQ14525 404 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF169Q14929 603 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 PPP2R5EQ16537 467 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 HIF1AQ16665 826 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 BCL7AQ4VC05 210 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 RPUSD3Q6P087 351 aaKnown RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 MRPL14Q6P1L8 145 aaKnown RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 FAM151BQ6UXP7 276 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CDHR3Q6ZTQ4 885 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 PLD5Q8N7P1 536 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 SPATA22Q8NHS9 363 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 DNAJB14Q8TBM8 379 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 LCN9Q8WX39 176 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CCM2Q9BSQ5 444 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CEP41Q9BYV8 373 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 GLOD4Q9HC38 313 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 HACD3Q9P035 362 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-211ENST00000508546 NDOR1Q9UHB4 597 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 GTF3C1Q12789 2109 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CSPG4Q6UVK1 2322 aa9.08□□□□□ -0.96
NEDD9-211ENST00000508546 CPAMD8Q8IZJ3 1885 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 STAB1Q9NY15 2570 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 A0A0A6YYK5 440 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 CCDC66A2RUB6 948 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 C2orf74A8MZ97 194 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 MASP2O00187 686 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 BTN3A3O00478 584 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 CNOT3O75175 753 aaKnown RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 PMPCBO75439 489 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 OR2B3O76000 313 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms