RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PIGHQ14442 188 aaPredicted RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 KRT81Q14533 505 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 STAT4Q14765 748 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 PTPRRQ15256 657 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 LLGL1Q15334 1064 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 TERF2Q15554 542 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 SLC18A3Q16572 532 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 C21orf62-AS1Q17RA5 79 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 PARP15Q460N3 678 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 BOLA3Q53S33 107 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 AFMIDQ63HM1 303 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 PPP1R2P3Q6NXS1 205 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 FAM180AQ6UWF9 173 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 GDPD4Q6W3E5 623 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 RFX8Q6ZV50 586 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 H2AFVQ71UI9 128 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 B4GALNT4Q76KP1 1039 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 ERN2Q76MJ5 926 aaKnown RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 PARS2Q7L3T8 475 aaKnown RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 ZNF572Q7Z3I7 529 aaPredicted RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 RABEPKQ7Z6M1 372 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 PIP4P1Q86T03 277 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 SPATS2Q86XZ4 545 aaKnown RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 GATAD2AQ86YP4 633 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 CAMK1DQ8IU85 385 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 LNX2Q8N448 690 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 PCDH20Q8N6Y1 951 aaKnown RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 NPWQ8N729 165 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 KCTD6Q8NC69 237 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 SLC35G2Q8TBE7 412 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 ZNF564Q8TBZ8 553 aaPredicted RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 ISG20Q96AZ6 181 aaKnown RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 FEM1CQ96JP0 617 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 CCDC114Q96M63 670 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 CCDC42Q96M95 316 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 CSPG4P5Q96PW8 444 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 TIMP4Q99727 224 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 WRAP53Q9BUR4 548 aaKnown RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 TM7SF3Q9NS93 570 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 ABHD10Q9NUJ1 306 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 LHX3Q9UBR4 397 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 UBA2Q9UBT2 640 aaPredicted RBP4.56□□□□□ -1.68
NUP54-206ENST00000508465 IP6K2Q9UHH9 426 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 NENFQ9UMX5 172 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 PLAAQ9Y263 795 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 DOCK9Q9BZ29 2069 aa4.56□□□□□ -1.68
NUP54-206ENST00000508465 MUC22E2RYF6 1773 aaPredicted RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 CNOT1A5YKK6 2376 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 DOCK4Q8N1I0 1966 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 NBEAQ8NFP9 2946 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PLXND1Q9Y4D7 1925 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 A0A0U1RQS6 177 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CCDC151A5D8V7 595 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 POM121BA6NF01 834 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 ZSCAN5CA6NGD5 496 aaPredicted RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 ARHGAP42A6NI28 874 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 C10orf142B7Z368 130 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 VILLO15195 856 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 ALOX15BO15296 676 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 LATO43561 262 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SDC3O75056 442 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PROSCO94903 275 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 IGSF6O95976 241 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 ATXN1LP0C7T5 689 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 MYF5P13349 255 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CEACAM1P13688 526 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 ADRB3P13945 408 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 DPP6P42658 865 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 MAGEA1P43355 309 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 HCAR3P49019 387 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 ARSEP51690 589 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 ZNF75DP51815 510 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 AIF1P55008 147 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 GEMIN4P57678 1058 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 SNRPD1P62314 119 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 HSD11B2P80365 405 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SLC25A11Q02978 314 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 SLC10A7Q0GE19 358 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SLC10A2Q12908 348 aaPredicted RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 SGCGQ13326 291 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SP140Q13342 867 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SHBQ15464 509 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 TRIP6Q15654 476 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 CYP2A13Q16696 494 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 INO80DQ53TQ3 878 aaPredicted RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 ZNF805Q5CZA5 627 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 TMCO3Q6UWJ1 677 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 Q6ZSR6 202 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SRLQ86TD4 932 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 HORMAD1Q86X24 394 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PSTKQ8IV42 348 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 NAXDQ8IW45 347 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PGBD5Q8N414 524 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CHCHD4Q8N4Q1 142 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 EID2Q8N6I1 236 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PAF1Q8N7H5 531 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 TC2NQ8N9U0 490 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SPC24Q8NBT2 197 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 OR2AP1Q8NGE2 309 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CTNNBL1Q8WYA6 563 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms