RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FAM126AQ9BYI3 521 aaPredicted RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 BRINP2Q9C0B6 783 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 PREBQ9HCU5 417 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 MRPL40Q9NQ50 206 aaKnown RBP14.23□□□□□ -0.13
DDX41-208ENST00000507955 GID8Q9NWU2 228 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 TMPRSS11EQ9UL52 423 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 ANGPTL3Q9Y5C1 460 aa14.23□□□□□ -0.13
DDX41-208ENST00000507955 TRBV5-4A0A0C4DH59 114 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 DHRS12A0PJE2 317 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 S100BP04271 92 aaPredicted RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 CTSAP10619 480 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 HSPA8P11142 646 aaKnown RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 ALDH3B2P48448 385 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 OR4D2P58180 307 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 ILF2Q12905 390 aaKnown RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 TEAD2Q15562 447 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 CYP51A1Q16850 503 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 PLPP4Q5VZY2 271 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 C22orf39Q6P5X5 142 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 LILRA6Q6PI73 481 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 CYP20A1Q6UW02 462 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 DNAJC14Q6Y2X3 702 aaPredicted RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 CYB5D2Q8WUJ1 264 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 RHBDF1Q96CC6 855 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 SUV39H2Q9H5I1 410 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 CROCCQ5TZA2 2017 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 SCN8AQ9UQD0 1980 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 VPS4BO75351 444 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 B3GALT4O96024 378 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 DGKAP23743 735 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 NEK2P51955 445 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 CPSF6Q16630 551 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDX41-208ENST00000507955 TMEM259Q4ZIN3 620 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 TMEM215Q68D42 235 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 ZBTB49Q6ZSB9 765 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 CMTR2Q8IYT2 770 aaKnown RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 RNF175Q8N4F7 328 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 KRTCAP2Q8N6L1 136 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 FAM81AQ8TBF8 368 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 FOXJ1Q92949 421 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 SCRN2Q96FV2 425 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 LMLNQ96KR4 655 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 KCTD14Q9BQ13 255 aaPredicted RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 TCF25Q9BQ70 676 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 BBS2Q9BXC9 721 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 RIC8BQ9NVN3 520 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 CXXC1Q9P0U4 656 aaPredicted RBP14.22□□□□□ -0.13
DDX41-208ENST00000507955 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 TMCO1Q9UM00 188 aa14.22□□□□□ -0.13
DDX41-208ENST00000507955 DENND4CQ5VZ89 1909 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 EEDO75530 441 aaKnown RBP14.21□□□□□ -0.13
DDX41-208ENST00000507955 TRMUO75648 421 aaKnown RBP14.21□□□□□ -0.13
DDX41-208ENST00000507955 CLIC3O95833 236 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 RGS4P49798 205 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 SH3BGRP55822 239 aaPredicted RBP14.21□□□□□ -0.13
DDX41-208ENST00000507955 SNRPD1P62314 119 aaKnown RBP14.21□□□□□ -0.13
DDX41-208ENST00000507955 HPCAP84074 193 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 CBR4Q8N4T8 237 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 ANKFN1Q8N957 763 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 FAM47BQ8NA70 645 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 PDPRQ8NCN5 879 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 ANKRD60Q9BZ19 345 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 CD244Q9BZW8 370 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 BRD9Q9H8M2 597 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 ASAH2Q9NR71 780 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 OPTCQ9UBM4 332 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 B4GALT6Q9UBX8 382 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 OARD1Q9Y530 152 aa14.21□□□□□ -0.13
DDX41-208ENST00000507955 SOCS5O75159 536 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 STAMBPO95630 424 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 HSD17B1P14061 328 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 RPS3P23396 243 aaKnown RBP eCLIP14.21□□□□□ -0.147e-10■■■■□ 20.3
DDX41-208ENST00000507955 EMP3P54852 163 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 PRKG2Q13237 762 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 BOP1Q14137 746 aaKnown RBP14.21□□□□□ -0.14
DDX41-208ENST00000507955 PYCR3Q53H96 274 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 TPRG1Q6ZUI0 275 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 CPXM2Q8N436 756 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 GAB3Q8WWW8 586 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 ZSWIM3Q96MP5 696 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 RPF2Q9H7B2 306 aaKnown RBP14.21□□□□□ -0.14
DDX41-208ENST00000507955 CCM2LQ9NUG4 571 aaPredicted RBP14.21□□□□□ -0.14
DDX41-208ENST00000507955 CCL27Q9Y4X3 112 aa14.21□□□□□ -0.14
DDX41-208ENST00000507955 NUP214P35658 2090 aaPredicted RBP14.2□□□□□ -0.14
DDX41-208ENST00000507955 UPK3BL1B0FP48 263 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 UPK3BL2E5RIL1 263 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 ANKRD28O15084 1053 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 OTCP00480 354 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 C1SP09871 688 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 PLOD1Q02809 727 aaPredicted RBP14.2□□□□□ -0.14
DDX41-208ENST00000507955 TBC1D25Q3MII6 688 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 GRAMD4Q6IC98 578 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 PPP4R4Q6NUP7 873 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 DLEU7Q6UYE1 221 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 ERMP1Q7Z2K6 904 aa14.2□□□□□ -0.14
DDX41-208ENST00000507955 ZFAND4Q86XD8 727 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms