RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DPH2Q9BQC3 489 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 TMEM121Q9BTD3 319 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 TSSK1BQ9BXA7 367 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 TWSG1Q9GZX9 223 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 OR52A5Q9H2C5 316 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 FAM8A1Q9UBU6 413 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 POLG2Q9UHN1 485 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 SERTAD3Q9UJW9 196 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 PIPSLA2A3N6 862 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 MROH6A6NGR9 719 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 E7EVH7 732 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 RFPL1O75677 317 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 SUN1O94901 812 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 FTCDO95954 541 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 CD63P08962 238 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 RAB40ALP0C0E4 278 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 OR56A5P0C7T3 313 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 POLR2CP19387 275 aaPredicted RBP14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 F8A1P23610 371 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 PTPN4P29074 926 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 SHMT2P34897 504 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 LMAN1P49257 510 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 KPNA2P52292 529 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 PMS2P54278 862 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 PPP1CAP62136 330 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 KLRB1Q12918 225 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 ERV3-1Q14264 604 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 IZUMO3Q5VZ72 239 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 DUS1LQ6P1R4 473 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 AMIGO1Q86WK6 493 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 TMEM139Q8IV31 216 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 CT55Q8WUE5 264 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 ABHD17AQ96GS6 310 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 RANBP9Q96S59 729 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 CHRNA10Q9GZZ6 450 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 FAM96AQ9H5X1 160 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 SMARCAL1Q9NZC9 954 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 MAN2B2Q9Y2E5 1009 aa14.02□□□□□ -0.17
HMGCS1-203ENST00000507004 GSAPA4D1B5 854 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 CDC14CA4D256 554 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 ADRA1DP25100 572 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 PRDX3P30048 256 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 PREPP48147 710 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 TLE1Q04724 770 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 BOP1Q14137 746 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 KCNAB1Q14722 419 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 DBN1Q16643 649 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 UGT8Q16880 541 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 ZNF658BQ4V348 819 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 AARS2Q5JTZ9 985 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 AFTPHQ6ULP2 937 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 PPP1R21Q6ZMI0 780 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 ZNF517Q6ZMY9 492 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 TBC1D21Q8IYX1 336 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 OR52E1Q8NGJ3 308 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 MAIP1Q8WWC4 291 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 MR1Q95460 341 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 SGSM3Q96HU1 749 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 SLC7A5P2Q9GIP4 190 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 ACTL8Q9H568 366 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 OR6C2Q9NZP2 312 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 PAK5Q9P286 719 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 PACSIN2Q9UNF0 486 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 ZNF148Q9UQR1 794 aa14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 FARSAQ9Y285 508 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 MRPS18BQ9Y676 258 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-203ENST00000507004 SLC9B1P1A6NJY1 282 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 LIASO43766 372 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 TIAF1O95411 115 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 NTRK1P04629 796 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 RPN2P04844 631 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 TPH1P17752 444 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 GDF10P55107 478 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 OASLQ15646 514 aaKnown RBP14□□□□□ -0.17
HMGCS1-203ENST00000507004 SYTL3Q4VX76 610 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 SLC13A5Q86YT5 568 aaPredicted RBP14□□□□□ -0.17
HMGCS1-203ENST00000507004 HPS6Q86YV9 775 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 CCDC89Q8N998 374 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 ELMO1Q92556 727 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 DHRS4Q9BTZ2 278 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 ANAPC5Q9UJX4 755 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 ASF1AQ9Y294 204 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 PCDHGB7Q9Y5F8 929 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 MRFAP1Q9Y605 127 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 CAPN6Q9Y6Q1 641 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 AP1M2Q9Y6Q5 423 aa14□□□□□ -0.17
HMGCS1-203ENST00000507004 PIKFYVEQ9Y2I7 2098 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 MEN1O00255 615 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 CCL22O00626 93 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 ZIC2O95409 532 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 IFNB1P01574 187 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 CYP2A7P20853 494 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 AGXTP21549 392 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 FOXN2P32314 431 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 PRAMEP78395 509 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 NFKB2Q00653 900 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms