RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ACADLP28330 430 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 PREPP48147 710 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 HSD11B2P80365 405 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 ACY1Q03154 408 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 CDC20Q12834 499 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 TUBB3Q13509 450 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 BOP1Q14137 746 aaKnown RBP8.82□□□□□ -1
PDLIM5-209ENST00000506632 KCNAB1Q14722 419 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 LYPLAL1Q5VWZ2 237 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 PWWP2BQ6NUJ5 590 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 AFTPHQ6ULP2 937 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 C6orf15Q6UXA7 325 aaPredicted RBP8.82□□□□□ -1
PDLIM5-209ENST00000506632 C4orf22Q6V702 233 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 PPP1R21Q6ZMI0 780 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 NLRP9Q7RTR0 991 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 ZNF605Q86T29 641 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 BPHLQ86WA6 291 aaPredicted RBP8.82□□□□□ -1
PDLIM5-209ENST00000506632 RASGRP3Q8IV61 690 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 UNC5BQ8IZJ1 945 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 CCDC89Q8N998 374 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 GALNT6Q8NCL4 622 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 OR4E2Q8NGC2 313 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 MAIP1Q8WWC4 291 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 LCN9Q8WX39 176 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 STARD8Q92502 1023 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 TFGQ92734 400 aaPredicted RBP8.82□□□□□ -1
PDLIM5-209ENST00000506632 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.82□□□□□ -1
PDLIM5-209ENST00000506632 KIAA1143Q96AT1 154 aaPredicted RBP8.82□□□□□ -1
PDLIM5-209ENST00000506632 PPM1MQ96MI6 270 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 CATSPER2Q96P56 530 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 NRTNQ99748 197 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 PITPNM3Q9BZ71 974 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 TFB2MQ9H5Q4 396 aaKnown RBP8.82□□□□□ -1
PDLIM5-209ENST00000506632 MVB12BQ9H7P6 319 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 PDE7BQ9NP56 450 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 FGF21Q9NSA1 209 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 RARRES3Q9UL19 164 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 PPP2R2CQ9Y2T4 447 aa8.82□□□□□ -1
PDLIM5-209ENST00000506632 UBA6A0AVT1 1052 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 IFRD1O00458 451 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 BTN3A3O00478 584 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 BTN3A1O00481 513 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 NKX2-8O15522 239 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 OR1I1O60431 355 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 GAS8O95995 478 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 FTH1P02794 183 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 MSL3P1P0C860 447 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 SFTPCP11686 197 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 POLR2CP19387 275 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 OAS2P29728 719 aaKnown RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 PRDX3P30048 256 aaKnown RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 KCNJ1P48048 391 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ARCN1P48444 511 aaKnown RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 LMAN1P49257 510 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 TUBB4BP68371 445 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 PLOD1Q02809 727 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 TUBB2AQ13885 445 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 SEMA3AQ14563 771 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 PCID2Q5JVF3 399 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ARMC6Q6NXE6 501 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ZNF449Q6P9G9 518 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 BORAQ6PGQ7 559 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ZNF517Q6ZMY9 492 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 ADGRF3Q8IZF5 1079 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 PRELID2Q8N945 189 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 PHC3Q8NDX5 983 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 OR52E1Q8NGJ3 308 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 OR4L1Q8NH43 312 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 OR8K5Q8NH50 307 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ZNF501Q96CX3 271 aaPredicted RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 ELMO2Q96JJ3 720 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 FERD3LQ96RJ6 166 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 HGH1Q9BTY7 390 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 TUBB2BQ9BVA1 445 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 ADNPQ9H2P0 1102 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 SRMSQ9H3Y6 488 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 LATS2Q9NRM7 1088 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 C1GALT1Q9NS00 363 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 TREX1Q9NSU2 369 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 GEMIN8Q9NWZ8 242 aaKnown RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 LNPEPQ9UIQ6 1025 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 TUBD1Q9UJT1 453 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 CROTQ9UKG9 612 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 CDYLQ9Y232 598 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 PCDHGA6Q9Y5G7 932 aa8.81□□□□□ -1
PDLIM5-209ENST00000506632 MRPS18BQ9Y676 258 aaKnown RBP8.81□□□□□ -1
PDLIM5-209ENST00000506632 SPTBP11277 2137 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
PDLIM5-209ENST00000506632 CEP104O60308 925 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 GPC4O75487 556 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 RECKO95980 971 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 MT-ND3P03897 115 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 OR56A5P0C7T3 313 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TPBGLP0DKB5 382 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TPSB2P20231 275 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 ARNTP27540 789 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 CXCR5P32302 372 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 DLSTP36957 453 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms