RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CASC4Q6P4E1 433 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 KMT5CQ86Y97 462 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 LSM14AQ8ND56 463 aaKnown RBP15.16■□□□□ 0.02
CLDND1-211ENST00000506575 KIAA1143Q96AT1 154 aaPredicted RBP15.16■□□□□ 0.02
CLDND1-211ENST00000506575 ELMO2Q96JJ3 720 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 HGH1Q9BTY7 390 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 ULBP3Q9BZM4 244 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
CLDND1-211ENST00000506575 MRM3Q9HC36 420 aaKnown RBP15.16■□□□□ 0.02
CLDND1-211ENST00000506575 PDE7BQ9NP56 450 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 TREX1Q9NSU2 369 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 SYBUQ9NX95 663 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 SAMD15Q9P1V8 674 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 ASF1AQ9Y294 204 aa15.16■□□□□ 0.02
CLDND1-211ENST00000506575 ATMQ13315 3056 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 SMG1Q96Q15 3661 aaKnown RBP15.15■□□□□ 0.02
CLDND1-211ENST00000506575 GSAPA4D1B5 854 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 PFDN6O15212 129 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 NDUFS3O75489 264 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 ITGB6P18564 788 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 MAGEA6P43360 314 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 ARCN1P48444 511 aaKnown RBP15.15■□□□□ 0.02
CLDND1-211ENST00000506575 FNTAP49354 379 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 PRKG2Q13237 762 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 NAPRTQ6XQN6 538 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 LDB1Q86U70 411 aaPredicted RBP15.15■□□□□ 0.02
CLDND1-211ENST00000506575 PPP1R3BQ86XI6 285 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 CARFQ8N187 725 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 MPP5Q8N3R9 675 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 OR52E1Q8NGJ3 308 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 SLC41A2Q96JW4 573 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 PDLIM2Q96JY6 352 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 KIFC1Q9BW19 673 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 TFB2MQ9H5Q4 396 aaKnown RBP15.15■□□□□ 0.02
CLDND1-211ENST00000506575 SOHLH2Q9NX45 425 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 SEMA5BQ9P283 1151 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 MARCH4Q9P2E8 410 aaPredicted RBP15.15■□□□□ 0.02
CLDND1-211ENST00000506575 SOX13Q9UN79 622 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 TMEM184BQ9Y519 407 aaPredicted RBP15.15■□□□□ 0.02
CLDND1-211ENST00000506575 PCDHGA4Q9Y5G9 962 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 PIEZO2Q9H5I5 2752 aa15.15■□□□□ 0.02
CLDND1-211ENST00000506575 KALRNO60229 2985 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 SLC5A10A0PJK1 596 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TK2O00142 265 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 PRMT5O14744 637 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 KDM1AO60341 852 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 AVILO75366 819 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 VAPBO95292 243 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 ZBTB11O95625 1053 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 FGF5P12034 268 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TCP1P17987 556 aaKnown RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 PAMP19021 973 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 CDH3P22223 829 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 CSE1LP55060 971 aaKnown RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 HSD11B2P80365 405 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 ACY1Q03154 408 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TUBB3Q13509 450 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TMED2Q15363 201 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TMTC4Q5T4D3 741 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 ARMC3Q5W041 872 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 PTRHD1Q6GMV3 140 aaKnown RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 MRNIPQ6NTE8 343 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 CES3Q6UWW8 571 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 SDCCAG8Q86SQ7 713 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 AMIGO1Q86WK6 493 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TBC1D21Q8IYX1 336 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 ESX1Q8N693 406 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 OR5AR1Q8NGP9 310 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 ASZ1Q8WWH4 475 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 CPT1BQ92523 772 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 MFSD3Q96ES6 412 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 CARD6Q9BX69 1037 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 SPRY4Q9C004 299 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 GPN2Q9H9Y4 310 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 XAB2Q9HCS7 855 aaKnown RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 POLG2Q9UHN1 485 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 GNPTGQ9UJJ9 305 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 RARRES3Q9UL19 164 aa15.14■□□□□ 0.01
CLDND1-211ENST00000506575 TDRKHQ9Y2W6 561 aaKnown RBP15.14■□□□□ 0.01
CLDND1-211ENST00000506575 GOLGA8MH3BSY2 632 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 BTN3A1O00481 513 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 ZNF185O15231 689 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 MAP3K7O43318 606 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 DLGAP3O95886 979 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 APOA4P06727 396 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 EBLN1P0CF75 366 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 MLNP12872 115 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 LIFP15018 202 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 CCR7P32248 378 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 KPNA2P52292 529 aaKnown RBP15.13■□□□□ 0.01
CLDND1-211ENST00000506575 GNG11P61952 73 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 ABHD18Q0P651 414 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 HSPA14Q0VDF9 509 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 KCNAB1Q14722 419 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 PPP1R7Q15435 360 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLDND1-211ENST00000506575 ANKRD22Q5VYY1 191 aa15.13■□□□□ 0.01
CLDND1-211ENST00000506575 C6orf15Q6UXA7 325 aaPredicted RBP15.13■□□□□ 0.01
CLDND1-211ENST00000506575 TIPARPQ7Z3E1 657 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms