RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 B3GALT5Q9Y2C3 310 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 OVOS2A0A0G2JMS6 1433 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 OVOS2A0A0J9YW53 1432 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 USP6P35125 1406 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CPSF1Q10570 1443 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 OVOS2Q6IE36 1432 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CENPJQ9HC77 1338 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 NUP188Q5SRE5 1749 aa3.16□□□□□ -1.9
TRAPPC11-205ENST00000506426 CPDO75976 1380 aa3.15□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLIT3O75094 1523 aa3.15□□□□□ -1.9
TRAPPC11-205ENST00000506426 PIK3C2AO00443 1686 aa3.15□□□□□ -1.9
TRAPPC11-205ENST00000506426 HTR3EA5X5Y0 456 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SMTNL1A8MU46 457 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 H0YAE9 185 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPRY3O43610 288 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SIX3O95343 332 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CH25HO95992 272 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 LCATP04180 440 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CASTP20810 708 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PTMSP20962 102 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 GABRA5P31644 462 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 RFX5P48382 616 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 MXI1P50539 228 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CLCNKAP51800 687 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CTSCP53634 463 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 LIMK1P53667 647 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SEC61BP60468 96 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CDK3Q00526 305 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 YWHAHQ04917 246 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SRSF4Q08170 494 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 ACSM1Q08AH1 577 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 TUBB2AQ13885 445 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 HNF4GQ14541 408 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLMAPQ14BN4 828 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SRSF7Q16629 238 aaKnown RBP eCLIP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PRTGQ2VWP7 1150 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 KCNT1Q5JUK3 1230 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 C6orf136Q5SQH8 315 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 RNASEH2BQ5TBB1 312 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PXDC1Q5TGL8 231 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 ALS2CLQ60I27 953 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 RGMBQ6NW40 437 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 BRAT1Q6PJG6 821 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 FIGLAQ6QHK4 219 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZBTB49Q6ZSB9 765 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 C11orf57Q6ZUT1 292 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 TOM1L2Q6ZVM7 507 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPATA21Q7Z572 469 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPATA19Q7Z5L4 167 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 MRPL10Q7Z7H8 261 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PIP4P1Q86T03 277 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF595Q8IYB9 648 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLC5A8Q8N695 610 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 NANOGP1Q8N7R0 232 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLC4A11Q8NBS3 891 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PAPD5Q8NDF8 572 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 THAP6Q8TBB0 222 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 OIT3Q8WWZ8 545 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 ROBO4Q8WZ75 1007 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 EXT2Q93063 718 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 MR1Q95460 341 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLAMF9Q96A28 289 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 TXNDC15Q96J42 360 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PRMT6Q96LA8 375 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 RMDN2Q96LZ7 410 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CCDC43Q96MW1 224 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 LRRC3BQ96PB8 259 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 OR6C1Q96RD1 312 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 SEPHS2Q99611 448 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 TUBB2BQ9BVA1 445 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 WNT5BQ9H1J7 359 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 PRMT7Q9NVM4 692 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CHCHD3Q9NX63 227 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 RCC2Q9P258 522 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 FZD10Q9ULW2 581 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 KLHL20Q9Y2M5 609 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 CRB1P82279 1406 aa3.15□□□□□ -1.91
TRAPPC11-205ENST00000506426 MYOM1P52179 1685 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 RREB1Q92766 1687 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 ITSN1Q15811 1721 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 PEAK1Q9H792 1746 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 A0A087WV48 116 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 A0A0U1RQK1 487 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 hDV102S1A0JD36 115 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF320A2RRD8 509 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 ANKUB1A6NFN9 424 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 TRIM77I1YAP6 450 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 DNM1LO00429 736 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 SOCS6O14544 535 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 TO15178 435 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 MED24O75448 989 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 GAGE7O76087 117 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 GBAP04062 536 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 FGF2P09038 288 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 DANCRP0C864 163 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 GAGE12FP0CL80 117 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 GAGE12GP0CL81 117 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 GAGE12IP0CL82 117 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 PRF1P14222 555 aa3.14□□□□□ -1.91
TRAPPC11-205ENST00000506426 KCNA5P22460 613 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms