RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CDC23Q9UJX2 597 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 MED16Q9Y2X0 877 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 COLEC10Q9Y6Z7 277 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 A0A087WV48 116 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 UBA6A0AVT1 1052 aaPredicted RBP17.36■□□□□ 0.37
SMN1-204ENST00000506163 FAM187AA6NFU0 413 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 IFRD1O00458 451 aaPredicted RBP17.36■□□□□ 0.37
SMN1-204ENST00000506163 PRAMEF10O60809 474 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 NIPSNAP2O75323 286 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 SLCO2B1O94956 709 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 PGAM1P18669 254 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 ITPKBP27987 946 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 ELK3P41970 407 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 SLC1A2P43004 574 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 MAPK10P53779 464 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 HSPA14Q0VDF9 509 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 PLCL1Q15111 1095 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 HSP90AA5PQ58FG0 334 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 DNAJC21Q5F1R6 531 aaKnown RBP17.36■□□□□ 0.37
SMN1-204ENST00000506163 PTRHD1Q6GMV3 140 aaKnown RBP17.36■□□□□ 0.37
SMN1-204ENST00000506163 ZNF549Q6P9A3 640 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 FAM92BQ6ZTR7 304 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 LRRC6Q86X45 466 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 SLC22A15Q8IZD6 547 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 NAF1Q96HR8 494 aaKnown RBP17.36■□□□□ 0.37
SMN1-204ENST00000506163 DCBLD2Q96PD2 775 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 ERP44Q9BS26 406 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 RAB33BQ9H082 229 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 ZMYND15Q9H091 742 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 FBXO6Q9NRD1 293 aaPredicted RBP17.36■□□□□ 0.37
SMN1-204ENST00000506163 THSD1Q9NS62 852 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 PCDHGA7Q9Y5G6 932 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 HEBP2Q9Y5Z4 205 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 TEX264Q9Y6I9 313 aa17.36■□□□□ 0.37
SMN1-204ENST00000506163 OR6C74A6NCV1 312 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 OR5K3A6NET4 321 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 EFCAB7A8K855 629 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 BTN3A3O00478 584 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 KRT37O76014 449 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 ANKRD34CP0C6C1 535 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 ERVK-10P10266 1014 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 CSTF2P33240 577 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMN1-204ENST00000506163 MLLT3P42568 568 aaPredicted RBP17.35■□□□□ 0.37
SMN1-204ENST00000506163 ADARP55265 1226 aaKnown RBP17.35■□□□□ 0.37
SMN1-204ENST00000506163 MPP1Q00013 466 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 KRT33BQ14525 404 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 FASTKD3Q14CZ7 662 aaKnown RBP17.35■□□□□ 0.37
SMN1-204ENST00000506163 DUPD1Q68J44 220 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 IRGCQ6NXR0 463 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMN1-204ENST00000506163 ACVR1CQ8NER5 493 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 OR52E1Q8NGJ3 308 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 FAM136AQ96C01 138 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 HGH1Q9BTY7 390 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 DPH5Q9H2P9 285 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 XKR8Q9H6D3 395 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 MVB12BQ9H7P6 319 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 HRASLS2Q9NWW9 162 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 GRHL1Q9NZI5 618 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 SEMA5BQ9P283 1151 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 GNPTGQ9UJJ9 305 aa17.35■□□□□ 0.37
SMN1-204ENST00000506163 NVLO15381 856 aaKnown RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 URI1O94763 535 aaPredicted RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 HAUS5O94927 633 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 NDUFS1P28331 727 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 GABRB3P28472 473 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 SEPHS1P49903 392 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 ABRQ12979 859 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 THOC5Q13769 683 aaKnown RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 SYTL3Q4VX76 610 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 RNF187Q5TA31 235 aaPredicted RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 ZNF449Q6P9G9 518 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 UNC5AQ6ZN44 842 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 KCNMB4Q86W47 210 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 PDIK1LQ8N165 341 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 HNRNPLLQ8WVV9 542 aaKnown RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 LCN9Q8WX39 176 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 KLHL6Q8WZ60 621 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 ART4Q93070 314 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 SLC30A3Q99726 388 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 TFB2MQ9H5Q4 396 aaKnown RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 APMAPQ9HDC9 416 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 IARS2Q9NSE4 1012 aaKnown RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 SIDT1Q9NXL6 827 aaKnown RBP17.34■□□□□ 0.37
SMN1-204ENST00000506163 SLC17A6Q9P2U8 582 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 FBXO5Q9UKT4 447 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 CHMP2BQ9UQN3 213 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 ASF1AQ9Y294 204 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 B3GALT1Q9Y5Z6 326 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 PTPRQQ9UMZ3 2332 aa17.34■□□□□ 0.37
SMN1-204ENST00000506163 IGHV5-51A0A0C4DH38 117 aa17.33■□□□□ 0.36
SMN1-204ENST00000506163 B4E171 279 aa17.33■□□□□ 0.36
SMN1-204ENST00000506163 E7ESA3 106 aa17.33■□□□□ 0.36
SMN1-204ENST00000506163 SMAPO00193 183 aa17.33■□□□□ 0.36
SMN1-204ENST00000506163 ESR1P03372 595 aa17.33■□□□□ 0.36
SMN1-204ENST00000506163 POLR2CP19387 275 aaPredicted RBP17.33■□□□□ 0.36
SMN1-204ENST00000506163 TSPAN7P41732 249 aa17.33■□□□□ 0.36
SMN1-204ENST00000506163 KPNA2P52292 529 aaKnown RBP17.33■□□□□ 0.36
SMN1-204ENST00000506163 PCBP4P57723 403 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms