RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 FAM199XQ6PEV8 388 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 PPP1R21Q6ZMI0 780 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 ATG14Q6ZNE5 492 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 LINC00523Q86TU6 105 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 OOSP2Q86WS3 158 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 VRK3Q8IV63 474 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 D2HGDHQ8N465 521 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 PRELID2Q8N945 189 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 SIDT2Q8NBJ9 832 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 SLC38A9Q8NBW4 561 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 OR5AR1Q8NGP9 310 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 STARD8Q92502 1023 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 FRMD8P1Q9BZ68 369 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 KLHL25Q9H0H3 589 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 CHRAC1Q9NRG0 131 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 LNPEPQ9UIQ6 1025 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 POMT2Q9UKY4 750 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 PPP2R2CQ9Y2T4 447 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 UBR5O95071 2799 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 SLC9B1P1A6NJY1 282 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ERI2A8K979 691 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 GOLGA6L6A8MZA4 724 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 F7P08709 466 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ST6GAL1P15907 406 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ARNTP27540 789 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 NMBRP28336 390 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 CSE1LP55060 971 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ABRQ12979 859 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 MAP7Q14244 749 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ITIH4Q14624 930 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 IL11RAQ14626 422 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 TTC27Q6P3X3 843 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 C6orf15Q6UXA7 325 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 PACS1Q6VY07 963 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ADGRF3Q8IZF5 1079 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 KRT222Q8N1A0 295 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ZSCAN1Q8NBB4 408 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ACVR1CQ8NER5 493 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 FLVCR1-AS1Q8TAF5 88 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 CT55Q8WUE5 264 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 HEXDCQ8WVB3 486 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 UBXN4Q92575 508 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 ZNF501Q96CX3 271 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 TRIM56Q9BRZ2 755 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 FGF21Q9NSA1 209 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 PAK5Q9P286 719 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 PLAGL1Q9UM63 463 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 CDYLQ9Y232 598 aa16.25■□□□□ 0.19
PDLIM7-215ENST00000506161 HEATR9A2RTY3 570 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ZNF891A8MT65 544 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 CEP104O60308 925 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 CTSBP07858 339 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ADRA1DP25100 572 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 PEBP1P30086 187 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 DLSTP36957 453 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 NSG1P42857 185 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 LMAN1P49257 510 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 SESN2P58004 480 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 RPS18P62269 152 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 LAMB3Q13751 1172 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 TRIP13Q15645 432 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 SKIDA1Q1XH10 827 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ZNF789Q5FWF6 425 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 C16orf46Q6P387 395 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 DRICH1Q6PGQ1 229 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 CES3Q6UWW8 571 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 TRIM73Q86UV7 250 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 PPP1R3BQ86XI6 285 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ESX1Q8N693 406 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ZFPM2Q8WW38 1151 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ELMO1Q92556 727 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 TFGQ92734 400 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 MS4A14Q96JA4 679 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 TREX1Q9NSU2 369 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 STARD5Q9NSY2 213 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 SPHK1Q9NYA1 384 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 ANKMY1Q9P2S6 941 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 RIMKLBQ9ULI2 386 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 TTC7AQ9ULT0 858 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 DRG1Q9Y295 367 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 BTRCQ9Y297 605 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 COL12A1Q99715 3063 aa16.24■□□□□ 0.19
PDLIM7-215ENST00000506161 UBA6A0AVT1 1052 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 KLHL33A6NCF5 533 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 E7EVH7 732 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 AP2A2O94973 939 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 NDUFS1P28331 727 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 PRDX3P30048 256 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 CCR7P32248 378 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 POLE2P56282 527 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 GPS2Q13227 327 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 ZIC1Q15915 447 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 ANKRD22Q5VYY1 191 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 AFTPHQ6ULP2 937 aa16.23■□□□□ 0.19
PDLIM7-215ENST00000506161 MPP5Q8N3R9 675 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms