RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NPAS3Q8IXF0 933 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 GLB1L3Q8NCI6 653 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 HIPK4Q8NE63 616 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 ADCY4Q8NFM4 1077 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 OR2T11Q8NH01 316 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 ATL1Q8WXF7 558 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 GLMNQ92990 594 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 PPP2R3CQ969Q6 453 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 ESAMQ96AP7 390 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 TMPRSS11EQ9UL52 423 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 PDE10AQ9Y233 779 aa16.93■□□□□ 0.3
TRAPPC11-204ENST00000505676 PRSS51A0A1B0GVH4 220 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 WNT9AO14904 365 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ULK1O75385 1050 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 SLCO2B1O94956 709 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 JAK1P23458 1154 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 MS4A2Q01362 244 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ELAVL3Q14576 367 aaKnown RBP16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 LIPIQ6XZB0 460 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 DSG4Q86SJ6 1040 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZFAND4Q86XD8 727 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 DPP10Q8N608 796 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 EFCAB3Q8N7B9 438 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 GLYATL1Q969I3 302 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 LRRC58Q96CX6 371 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ACOX2Q99424 681 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZBTB18Q99592 522 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 VCXQ9H320 206 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 MAP10Q9P2G4 905 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 AQP12BA6NM10 295 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 NPIPB8E9PQR5 432 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ARNTLO00327 626 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 UGDHO60701 494 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ATG13O75143 517 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 BMP1P13497 986 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ARSAP15289 507 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ACPPP15309 386 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 SLC7A2P52569 658 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 DIO3P55073 304 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 BLMHQ13867 455 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 ADGRE1Q14246 886 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 VPS26BQ4G0F5 336 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 FAM78AQ5JUQ0 283 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 Q6ZVL8 140 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 RETREG3Q86VR2 466 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 SPATA24Q86W54 205 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 PDSS2Q86YH6 399 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 AQP12AQ8IXF9 295 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 SFRP1Q8N474 314 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 USP7Q93009 1102 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 SNX6Q9UNH7 406 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 AP3M1Q9Y2T2 418 aa16.92■□□□□ 0.3
TRAPPC11-204ENST00000505676 PRORSD1PA6NEY8 169 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 SLC6A12P48065 614 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 HSPA13P48723 471 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 PRLHRP49683 370 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 HSPA14Q0VDF9 509 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 TRIP10Q15642 601 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 TRIM68Q6AZZ1 485 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 KLHDC8AQ8IYD2 350 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 DNAJB8Q8NHS0 232 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 SORCS1Q8WY21 1168 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 ELMO1Q92556 727 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 FBXL8Q96CD0 374 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 LRRC3BQ96PB8 259 aa16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 RIOK2Q9BVS4 552 aaKnown RBP16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 CNOT11Q9UKZ1 510 aaKnown RBP16.91■□□□□ 0.3
TRAPPC11-204ENST00000505676 MYOFQ9NZM1 2061 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 TCRBV3S1A0A5B6 114 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CAPNS1P04632 268 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 ETV3P41162 512 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 GNPDA1P46926 289 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CLCN2P51788 898 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 EEFSECP57772 596 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 MRPS22P82650 360 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 SEMG2Q02383 582 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 PLOD1Q02809 727 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CREB5Q02930 508 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 NFYCQ13952 458 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 AP5B1Q2VPB7 878 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 FNDC3BQ53EP0 1204 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 RFLNAQ6ZTI6 216 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 PARS2Q7L3T8 475 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 DHFR2Q86XF0 187 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CPA6Q8N4T0 437 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 VN1R2Q8NFZ6 395 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 PIP4K2CQ8TBX8 421 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 AP2M1Q96CW1 435 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 DTD2Q96FN9 168 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 COQ10AQ96MF6 247 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CDK15Q96Q40 435 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 ABCG8Q9H221 673 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 Q9H521 79 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CCL27Q9Y4X3 112 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 DOCK6Q96HP0 2047 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 BPTFQ12830 3046 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 PRPH2P23942 346 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 SLC7A1P30825 629 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms