RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CCDC85BQ15834 202 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 GPR162Q16538 588 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PTCHD3Q3KNS1 767 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TBRG1Q3YBR2 411 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF404Q494X3 552 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ANKS6Q68DC2 871 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CYP20A1Q6UW02 462 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PAQR9Q6ZVX9 377 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 VTCN1Q7Z7D3 282 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 MIB1Q86YT6 1006 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 DCP2Q8IU60 420 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PHYKPLQ8IUZ5 450 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 HID1Q8IV36 788 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ASCC1Q8N9N2 400 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PIK3C3Q8NEB9 887 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 NETO1Q8TDF5 533 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 BPIFB1Q8TDL5 484 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 KCNC2Q96PR1 638 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PSD2Q9BQI7 771 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TSEN34Q9BSV6 310 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 DUSP16Q9BY84 665 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SLC6A13Q9NSD5 602 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PCDH10Q9P2E7 1040 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 OPTCQ9UBM4 332 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 C3orf18Q9UK00 162 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF225Q9UK10 706 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 AGO1Q9UL18 857 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 FER1L6Q2WGJ9 1857 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 LOC110117498-PIK3R3F6TDL0 507 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 TNFRSF10AO00220 468 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SLC22A1O15245 554 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 OR1I1O60431 355 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 ICMTO60725 284 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 ECI2O75521 394 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 PAPSS2O95340 614 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SLC25A27O95847 323 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 S1PR4O95977 384 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 APOA1P02647 267 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 OR4Q2P0C623 313 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 CCDC159P0C7I6 412 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 JUNBP17275 347 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SSTR4P31391 388 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 GRK5P34947 590 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SERPINH1P50454 418 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 HNRNPFP52597 415 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SMARCB1Q12824 385 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SNX17Q15036 470 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 AP5B1Q2VPB7 878 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SPANXN4Q5MJ08 99 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 C6orf136Q5SQH8 315 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 BEND5Q7L4P6 421 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 COLGALT2Q8IYK4 626 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 OR7G1Q8NGA0 311 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 UTP15Q8TED0 518 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 TMEM40Q8WWA1 233 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 FCRL2Q96LA5 508 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 GPR21Q99679 349 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 APOL5Q9BWW9 433 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 RPRD1BQ9NQG5 326 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 PDP1Q9P0J1 537 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 NUFIP1Q9UHK0 495 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 PKP3Q9Y446 797 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 TESMINQ9Y4I5 508 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 IGKV6-21A0A0C4DH24 114 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 CCDC162PA2VCL2 907 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 RGS10O43665 173 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 NIPSNAP2O75323 286 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 CYP11A1P05108 521 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SLC2A3P11169 496 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 GRK3P35626 688 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 LILRA4P59901 499 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 ALDH6A1Q02252 535 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 RCAN2Q14206 197 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 IHHQ14623 411 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 CARD16Q5EG05 197 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 PAMR1Q6UXH9 720 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 HACD2Q6Y1H2 254 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 EFL1Q7Z2Z2 1120 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 CYP2U1Q7Z449 544 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 HIPK1Q86Z02 1210 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 P3H2Q8IVL5 708 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SLC44A2Q8IWA5 706 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 RIMKLAQ8IXN7 391 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 ELMOD2Q8IZ81 293 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 EFHBQ8N7U6 833 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SIDT2Q8NBJ9 832 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 LEMD2Q8NC56 503 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 OMA1Q96E52 524 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 TSPAN17Q96FV3 270 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 PCED1BQ96HM7 432 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 SENP8Q96LD8 212 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 UBXN10Q96LJ8 280 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF583Q96ND8 569 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 PAAF1Q9BRP4 392 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 RANGRFQ9HD47 186 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 THG1LQ9NWX6 298 aaKnown RBP7.49□□□□□ -1.21
NEDD9-208ENST00000504387 ABCG2Q9UNQ0 655 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 KLHL20Q9Y2M5 609 aa7.49□□□□□ -1.21
NEDD9-208ENST00000504387 CXCR6O00574 342 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms