RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CTNNAL1Q9UBT7 734 aa12.96□□□□□ -0.33
PDLIM7-212ENST00000504380 CIDEBQ9UHD4 219 aa12.96□□□□□ -0.33
PDLIM7-212ENST00000504380 GOLGA4Q13439 2230 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 DCDC2BA2VCK2 349 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 KRT87PA6NCN2 255 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 FOXO6A8MYZ6 492 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 KPNA5O15131 536 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 TUBBP07437 444 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 MTHFD1P11586 935 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 KCNA4P22459 653 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 UBE2IP63279 158 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 RPA4Q13156 261 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 PRKG2Q13237 762 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 BIRC2Q13490 618 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 GBX1Q14549 363 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 CYHR1Q6ZMK1 362 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 PIWIL4Q7Z3Z4 852 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 PDZD3Q86UT5 571 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 TRIM48Q8IWZ4 208 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 SPATA6LQ8N4H0 392 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 OR5AR1Q8NGP9 310 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 EPS8L3Q8TE67 593 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 TFGQ92734 400 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 GLMNQ92990 594 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 CCDC74AQ96AQ1 378 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 LINGO1Q96FE5 620 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 DHRS4Q9BTZ2 278 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 UNKQ9C0B0 810 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 LRIT1Q9P2V4 623 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 CORO1CQ9ULV4 474 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 IKBKGQ9Y6K9 419 aa12.95□□□□□ -0.34
PDLIM7-212ENST00000504380 KIR2DS5A0A0G2JLQ3 304 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 A0A0G2JNG1 304 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 OR5K4A6NMS3 321 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 RHPN2P1A8MT19 583 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 KIR2DS3K7RE56 304 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 IFRD1O00458 451 aaPredicted RBP12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 VIPP01282 170 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 CKMT1AP12532 417 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC2A4P14672 509 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 CKMT2P17540 419 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 XRCC1P18887 633 aaPredicted RBP12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 BDKRB1P46663 353 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 RPIAP49247 311 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 OR1D5P58170 312 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 POU4F1Q01851 419 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 HHEXQ03014 270 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 KRT33BQ14525 404 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 KIR2DS5Q14953 304 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 TRIP6Q15654 476 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 TTLL9Q3SXZ7 439 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 CCSMST1Q4G0I0 132 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC9B2Q86UD5 537 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 LMNTD1Q8N9Z9 388 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 IFI44Q8TCB0 444 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 CCDC77Q9BR77 488 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 HGH1Q9BTY7 390 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 TBC1D10AQ9BXI6 508 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 TBK1Q9UHD2 729 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 IKZF3Q9UKT9 509 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 PLAAQ9Y263 795 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 ASF1AQ9Y294 204 aa12.94□□□□□ -0.34
PDLIM7-212ENST00000504380 BAHCC1Q9P281 2608 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 COL5A1P20908 1838 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 EME2A4GXA9 379 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 TRIM49D1C9J1S8 452 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 TNFSF14O43557 240 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 ADRB1P08588 477 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 SKIV2L2P42285 1042 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 MAPK9P45984 424 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 NOVA1P51513 510 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 CLDN6P56747 220 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 RAB10P61026 200 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 GPR18Q14330 331 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 BEND6Q5SZJ8 279 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 NKAIN2Q5VXU1 208 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 RAPH1Q70E73 1250 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 CYP4X1Q8N118 509 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 MREGQ8N565 214 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 CDC6Q99741 560 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC32A1Q9H598 525 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 XKR8Q9H6D3 395 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 GPAMQ9HCL2 828 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC40A1Q9NP59 571 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 SNX15Q9NRS6 342 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 KLHL42Q9P2K6 505 aa12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 TDRKHQ9Y2W6 561 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-212ENST00000504380 ASXL3Q9C0F0 2248 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 CCDC151A5D8V7 595 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 B4GAT1O43505 415 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms