RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 EIF3CLB5ME19 914 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GOLGA8NF8WBI6 632 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 H0YIV9 168 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 H3BQV1 296 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 H7C0S8 307 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GOLGA8RI6L899 631 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PSMD14O00487 310 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACKR2O00590 384 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 DVL1O14640 695 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 KMOO15229 486 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PLRG1O43660 514 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR5F1O95221 314 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 LUC7L3O95232 432 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 POP4O95707 220 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC4A1P02730 911 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 IFIT1P09914 478 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ALOX5P09917 674 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PCNAP12004 261 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 HPGDP15428 266 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRLRP16471 622 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 VCLP18206 1134 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 U2AF2P26368 475 aaKnown RBP eCLIP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHATP28329 748 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 AXLP30530 894 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 HOXA6P31267 233 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRKAR2BP31323 418 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 KRT9P35527 623 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACTN2P35609 894 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 HNF1BP35680 557 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 KRT20P35900 424 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CETN2P41208 172 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 HNF4AP41235 474 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMPOP42166 694 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CBX5P45973 191 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATP5OP48047 213 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 HSPA13P48723 471 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TKTL1P51854 596 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 DVL1P1P54792 670 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 DSCR10P59022 87 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCNA1P78396 465 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TNFAIP2Q03169 654 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SULT2A1Q06520 285 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SPAG1Q07617 926 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 KLHL30Q0D2K2 578 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 FOXO1Q12778 655 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CETN1Q12798 172 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRPC3Q13507 836 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 MXD4Q14582 209 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 STK38Q15208 465 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TSC22D1Q15714 1073 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC18A3Q16572 532 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM266Q2M3C6 531 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 EDRF1Q3B7T1 1238 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ESCO2Q56NI9 601 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 XKR3Q5GH77 459 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF484Q5JVG2 852 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PAPPA-AS1Q5QFB9 102 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 BEND6Q5SZJ8 279 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GPR139Q6DWJ6 353 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CENPPQ6IPU0 288 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 NEK5Q6P3R8 708 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZYG11AQ6WRX3 759 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF497Q6ZNH5 498 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 C3orf62Q6ZUJ4 267 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CENPQQ7L2Z9 268 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 LPCAT2Q7L5N7 544 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRSS45Q7RTY3 260 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PHLDB2Q86SQ0 1253 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC51BQ86UW2 128 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 HOOK3Q86VS8 718 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 VSIG1Q86XK7 387 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ERO1BQ86YB8 467 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GALNT13Q8IUC8 556 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF619Q8N2I2 560 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARL14Q8N4G2 192 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PARP16Q8N5Y8 322 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC63Q8NA47 563 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 LINS1Q8NG48 757 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SPATA22Q8NHS9 363 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 MGARPQ8TDB4 240 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 GDPD5Q8WTR4 605 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATL1Q8WXF7 558 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 PEX13Q92968 403 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRIM63Q969Q1 353 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ERGIC1Q969X5 290 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 LGALS12Q96DT0 336 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SGF29Q96ES7 293 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 RNFT2Q96EX2 444 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMA16Q96EY4 203 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 MASTLQ96GX5 879 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 MSANTD3Q96H12 275 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZC3HAV1LQ96H79 300 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CABS1Q96KC9 395 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNOT6LQ96LI5 555 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC43Q96MW1 224 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF583Q96ND8 569 aa1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 RPRD1AQ96P16 312 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 SECISBP2Q96T21 854 aaKnown RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 CITED2Q99967 270 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRC1Q9BTT6 524 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms