RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TULP2O00295 520 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 XRCC3O43542 346 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 DIAPH2O60879 1101 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TBX10O75333 385 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TADA2AO75478 443 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 GCNT3O95395 438 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 GGPS1O95749 300 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRUB2O95900 331 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 LIPFP07098 398 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SP1P08047 785 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SNRNP70P08621 437 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 MYBL1P10243 752 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 PFKFB1P16118 471 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 CPT2P23786 658 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 PSMA3P25788 255 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 EEF1DP29692 281 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 AHRP35869 848 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 PSMC4P43686 418 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF132P52740 706 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 CSE1LP55060 971 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 DLX5P56178 289 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 EEF1A2Q05639 463 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 WASHC5Q12768 1159 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TROAPQ12815 778 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 COASYQ13057 564 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SMC1AQ14683 1233 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF672Q499Z4 452 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TTC31Q49AM3 519 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 CRY2Q49AN0 593 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ODF2Q5BJF6 829 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 C1orf141Q5JVX7 400 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 GCNT6Q5T4J0 391 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM109BQ6ICB4 259 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLC9B2Q86UD5 537 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TMEM173Q86WV6 379 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 IQCA1Q86XH1 822 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ERC1Q8IUD2 1116 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 CEP57L1Q8IYX8 460 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ARL10Q8N8L6 244 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TC2NQ8N9U0 490 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TSPAN14Q8NG11 270 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 RDM1Q8NG50 284 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR6J1Q8NGC5 347 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR10S1Q8NGN2 331 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR2AJ1Q8NGZ0 328 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SPATA20Q8TB22 786 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 LNX1Q8TBB1 728 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SECTM1Q8WVN6 248 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 NXNL1Q96CM4 212 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SPACA9Q96E40 222 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 LINGO1Q96FE5 620 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 JAKMIP1Q96N16 626 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF830Q96NB3 372 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 OLFM1Q99784 485 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 C16orf70Q9BSU1 422 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 POLR3CQ9BUI4 534 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 FNDC11Q9BVV2 318 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR10A4Q9H209 315 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 OPA3Q9H6K4 179 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 KLHL1Q9NR64 748 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ABCF3Q9NUQ8 709 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 MIOSQ9NXC5 875 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 NPAP1Q9NZP6 1156 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 RHCGQ9UBD6 479 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 MTRRQ9UBK8 725 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 DDX25Q9UHL0 483 aaKnown RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 SOS1Q07889 1333 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF541Q9H0D2 1346 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TEX13DA0A0J9YY54 714 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 EDDM13A0A1B0GTR0 161 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ELOVL7A1L3X0 281 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ANKUB1A6NFN9 424 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 C5orf60A6NFR6 353 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 A8MXE2 369 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 SPRY1O43609 319 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 GPR137BO60478 399 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 TSPAN1O60635 241 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 MED24O75448 989 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 LDLRP01130 860 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 TFAP2AP05549 437 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 SCG2P13521 617 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF23P17027 643 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ATP5DP30049 168 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 MC5RP33032 325 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 TNNT3P45378 269 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 MLLT10P55197 1068 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 CDK3Q00526 305 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 PRKAA1Q13131 559 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 NR1D2Q14995 579 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF718Q3SXZ3 478 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 TCP11X2Q5H9J9 407 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM76BQ5HYJ3 339 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 RNASEH2BQ5TBB1 312 aaKnown RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 NDUFAF5Q5TEU4 345 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 KRT80Q6KB66 452 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 KLC3Q6P597 504 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 PLXDC2Q6UX71 529 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 KCTD8Q6ZWB6 473 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 PIWIL4Q7Z3Z4 852 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms