RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ZNF622Q969S3 477 aaKnown RBP eCLIP5.54□□□□□ -1.52
NIPBL-203ENST00000503274 INPP4AQ96PE3 977 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-203ENST00000503274 SRSF8Q9BRL6 282 aaKnown RBP5.54□□□□□ -1.52
NIPBL-203ENST00000503274 LRRC1Q9BTT6 524 aa5.54□□□□□ -1.52
NIPBL-203ENST00000503274 GHITMQ9H3K2 345 aa5.54□□□□□ -1.52
NIPBL-203ENST00000503274 N4BP2Q86UW6 1770 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-203ENST00000503274 CARMIL3Q8ND23 1372 aa5.54□□□□□ -1.52
NIPBL-203ENST00000503274 PCNTO95613 3336 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 OR5K3A6NET4 321 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 XPNPEP2O43895 674 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 HRH2P25021 359 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 FMO5P49326 533 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 TERF1P54274 439 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 RUNX1T1Q06455 604 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 IRF3Q14653 427 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 STXBP5Q5T5C0 1151 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 FAM205BPQ63HN1 556 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 FAM171BQ6P995 826 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 TPRG1Q6ZUI0 275 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 PLEKHM3Q6ZWE6 761 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 EPHX4Q8IUS5 362 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 ARID3BQ8IVW6 561 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-203ENST00000503274 RPAP2Q8IXW5 612 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-203ENST00000503274 SLC5A8Q8N695 610 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 GCSAMQ8N6F7 178 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 METTL27Q8N6F8 245 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-203ENST00000503274 CNBD1Q8NA66 436 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 SDF4Q9BRK5 362 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 TCF7L2Q9NQB0 619 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 HAUS2Q9NVX0 235 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 TRMT1Q9NXH9 659 aaKnown RBP5.53□□□□□ -1.52
NIPBL-203ENST00000503274 ZNF215Q9UL58 517 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-203ENST00000503274 CEMIPQ8WUJ3 1361 aa5.53□□□□□ -1.52
NIPBL-203ENST00000503274 MAPK8IP3Q9UPT6 1336 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 TJP1Q07157 1748 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 ANKRD18BA2A2Z9 1011 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 EIF3DO15371 548 aaKnown RBP eCLIP5.52□□□□□ -1.53
NIPBL-203ENST00000503274 IGLV2-11P01706 119 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 CRYAAP02489 173 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 ATP1A1P05023 1023 aaKnown RBP5.52□□□□□ -1.53
NIPBL-203ENST00000503274 HOXD13P35453 343 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 CTSCP53634 463 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 MC1RQ01726 317 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 CREB5Q02930 508 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 SPOCK1Q08629 439 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 MVPQ14764 893 aaKnown RBP5.52□□□□□ -1.53
NIPBL-203ENST00000503274 DUSP28Q4G0W2 176 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 PDSS1Q5T2R2 415 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 MZT2BQ6NZ67 158 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 KCTD8Q6ZWB6 473 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 Q75L30 129 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 MCM10Q7L590 875 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 NBPF5PQ86XG9 351 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-203ENST00000503274 OR52I2Q8NH67 350 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 PHF21AQ96BD5 680 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 FAM120BQ96EK7 910 aaKnown RBP5.52□□□□□ -1.53
NIPBL-203ENST00000503274 CCDC34Q96HJ3 373 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 EPYCQ99645 322 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 GFI1Q99684 422 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 POLR3CQ9BUI4 534 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-203ENST00000503274 PAG1Q9NWQ8 432 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 KLHL9Q9P2J3 617 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 POLG2Q9UHN1 485 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 ARFGEF1Q9Y6D6 1849 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 KCPQ6ZWJ8 1503 aa5.52□□□□□ -1.53
NIPBL-203ENST00000503274 VIRMAQ69YN4 1812 aaKnown RBP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 ADAMTS7Q9UKP4 1686 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 CTAGE9A4FU28 777 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 TMEM8BA6NDV4 472 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 GLTPD2A6NH11 291 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 AGAP14A8MT82 685 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 CAPN9O14815 690 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 BUD23O43709 281 aaKnown RBP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 ZNF217O75362 1048 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 CTAGE8P0CG41 777 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 ZNF23P17027 643 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 GM2AP17900 193 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 ARCN1P48444 511 aaKnown RBP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 RALBP1Q15311 655 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 RAB41Q5JT25 222 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 C9orf50Q5SZB4 431 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 PRR5LQ6MZQ0 368 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 CEP97Q8IW35 865 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 CTAGE4Q8IX94 777 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 SCYL3Q8IZE3 742 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 LMNTD1Q8N9Z9 388 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 DMBX1Q8NFW5 382 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 PPP4R1Q8TF05 950 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 DNASE2BQ8WZ79 361 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 LINGO1Q96FE5 620 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 MAK16Q9BXY0 300 aaKnown RBP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 NYXQ9GZU5 481 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 RAD21L1Q9H4I0 556 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 MARCH4Q9P2E8 410 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 ZNF112Q9UJU3 913 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 VPS28Q9UK41 221 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 EXO1Q9UQ84 846 aaKnown RBP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 NIP7Q9Y221 180 aaKnown RBP eCLIP5.51□□□□□ -1.53
NIPBL-203ENST00000503274 B3GALT5Q9Y2C3 310 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms