RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ADAMTSL2Q86TH1 951 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 NXPE1Q8N323 547 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 CLDN19Q8N6F1 224 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 OR56A4Q8NGH8 313 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ESAMQ96AP7 390 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ZNF641Q96N77 438 aaPredicted RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 MCCC1Q96RQ3 725 aaPredicted RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 NUSAP1Q9BXS6 441 aaKnown RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 HPS4Q9NQG7 708 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 TBC1D14Q9P2M4 693 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ATPIF1Q9UII2 106 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 BTRCQ9Y297 605 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 MYOFQ9NZM1 2061 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 LINC01553A4QN01 128 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 FBP2O00757 339 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 XYLBO75191 536 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 SLC25A14O95258 325 aaPredicted RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 TRIM16O95361 564 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 UGT2B4P06133 528 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
USP46-204ENST00000503060 LINC00032P0C843 101 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 GPX3P22352 226 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 PRDX3P30048 256 aaKnown RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 HAAOP46952 286 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ACADVLP49748 655 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 RGS4P49798 205 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 PKNOX1P55347 436 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 CDC16Q13042 620 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 CEACAM7Q14002 265 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 GRB7Q14451 532 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 RBBP7Q16576 425 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 LY6G5CQ5SRR4 150 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 REP15Q6BDI9 236 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ELMSAN1Q6PJG2 1045 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 PAOXQ6QHF9 649 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 SBSNQ6UWP8 590 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 FRA10AC1Q70Z53 315 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 EFL1Q7Z2Z2 1120 aaKnown RBP11.38□□□□□ -0.59
USP46-204ENST00000503060 SPRED2Q7Z698 418 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ADIPOR2Q86V24 386 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 FAM26EQ8N5C1 309 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 SNX31Q8N9S9 440 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 CHST14Q8NCH0 376 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 HIPK4Q8NE63 616 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 PHOSPHO2Q8TCD6 241 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 SAMD11Q96NU1 681 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 HTATIP2Q9BUP3 242 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 SLC25A23Q9BV35 468 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 CACNA2D2Q9NY47 1150 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ZNF225Q9UK10 706 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 ASB1Q9Y576 335 aa11.38□□□□□ -0.59
USP46-204ENST00000503060 AGAP14A8MT82 685 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 E2F3O00716 465 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 VPS4BO75351 444 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 PGRP06401 933 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 UROSP10746 265 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ACADSP16219 412 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 LBPP18428 481 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 XRCC1P18887 633 aaPredicted RBP11.37□□□□□ -0.59
USP46-204ENST00000503060 LHCGRP22888 699 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 DGKAP23743 735 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ETV3P41162 512 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 BLVRAP53004 296 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 PSME3P61289 254 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 CAMK1Q14012 370 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 MMEL1Q495T6 779 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 GPRIN3Q6ZVF9 776 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 Q6ZVU0 165 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ZBTB2Q8N680 514 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 OR9I1Q8NGQ6 314 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 GOT1L1Q8NHS2 421 aaPredicted RBP11.37□□□□□ -0.59
USP46-204ENST00000503060 TUBGCP3Q96CW5 907 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 DTNBP1Q96EV8 351 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ZSWIM3Q96MP5 696 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ZNF382Q96SR6 550 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 SARDHQ9UL12 918 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 RWDD3Q9Y3V2 267 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 WNT6Q9Y6F9 365 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 NOTCH4Q99466 2003 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 A0A1W2PQ67 120 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ME2P23368 584 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 PTSQ03393 145 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 PCBP2Q15366 365 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■■■ 40.3
USP46-204ENST00000503060 KIF19Q2TAC6 998 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 GPRC6AQ5T6X5 926 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 GRASPQ7Z6J2 395 aaPredicted RBP11.37□□□□□ -0.59
USP46-204ENST00000503060 KBTBD6Q86V97 674 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 FUNDC1Q8IVP5 155 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 SDCCAG3Q96C92 435 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 ZDHHC3Q9NYG2 299 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 MARK1Q9P0L2 795 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 PCDHGA7Q9Y5G6 932 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 TNPO3Q9Y5L0 923 aaKnown RBP11.37□□□□□ -0.59
USP46-204ENST00000503060 HCFC2Q9Y5Z7 792 aa11.37□□□□□ -0.59
USP46-204ENST00000503060 WASH3PC4AMC7 463 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 MRASO14807 208 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms