RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 KDM1AO60341 852 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 MFAP3LO75121 409 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 FKBP9O95302 570 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CBX6O95503 412 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ALBP02768 609 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ALPPP05187 535 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TPM1P09493 284 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PECAM1P16284 738 aaPredicted RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ITGALP20701 1170 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CDH3P22223 829 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 GNLYP22749 145 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 AKT1P31749 480 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CA5AP35218 305 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PTGIRP43119 386 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CHRNA4P43681 627 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 GCGRP47871 477 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PREPP48147 710 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 GABRA4P48169 554 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF140P52738 457 aaPredicted RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ITGA1P56199 1179 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ABRQ12979 859 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 BOP1Q14137 746 aaKnown RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PRPSAP1Q14558 356 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ITIH4Q14624 930 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 MYBPC3Q14896 1274 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 NOMO1Q15155 1222 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 GPR19Q15760 415 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CRB2Q5IJ48 1285 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 VWA5B1Q5TIE3 1220 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 YOD1Q5VVQ6 348 aaPredicted RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC6A19Q695T7 634 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 MRPL14Q6P1L8 145 aaKnown RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TLDC1Q6P9B6 456 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF449Q6P9G9 518 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PACS1Q6VY07 963 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CERS6Q6ZMG9 384 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 AMIGO1Q86WK6 493 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TICAM1Q8IUC6 712 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 VSTM4Q8IW00 320 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CFAP206Q8IYR0 622 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ADGRF3Q8IZF5 1079 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 IQCKQ8N0W5 287 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC34A3Q8N130 599 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ZBTB2Q8N680 514 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 RBMXL3Q8N7X1 1067 aaKnown RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 FDCSPQ8NFU4 85 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 IPMKQ8NFU5 416 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 OR4E2Q8NGC2 313 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 OR4K2Q8NGD2 314 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 OR1L3Q8NH93 324 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 UBE2Q2Q8WVN8 375 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TM9SF4Q92544 642 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PEX13Q92968 403 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 HAUS1Q96CS2 278 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 CLIP3Q96DZ5 547 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 DCUN1D1Q96GG9 259 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TCTN2Q96GX1 697 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SGSM3Q96HU1 749 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 RMDN2Q96LZ7 410 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 TRAPPC9Q96Q05 1148 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 RUFY1Q96T51 708 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 COPS8Q99627 209 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 GORASP1Q9BQQ3 440 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 FICDQ9BVA6 458 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 AP1M1Q9BXS5 423 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SRMSQ9H3Y6 488 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 COG4Q9H9E3 785 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SLAMF7Q9NQ25 335 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ZDHHC3Q9NYG2 299 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 UBP1Q9NZI7 540 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 OR6C2Q9NZP2 312 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SAE1Q9UBE0 346 aaPredicted RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 POLG2Q9UHN1 485 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 RSPH14Q9UHP6 348 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 PSMD13Q9UNM6 376 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SRPK3Q9UPE1 567 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 B3GNT3Q9Y2A9 372 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ALG6Q9Y672 507 aa5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 SPTAN1Q13813 2472 aaKnown RBP5.92□□□□□ -1.46
LSM3P4-201ENST00000502948 ENO4A6NNW6 628 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 TMEM150CB9EJG8 249 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 BTN3A3O00478 584 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF749O43361 778 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 LDB2O43679 373 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 SNRNP200O75643 2136 aaKnown RBP5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 LDLRP01130 860 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC4A1P02730 911 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 POLR2CP19387 275 aaPredicted RBP5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 CYP2A7P20853 494 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 ACRV1P26436 265 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 ACADLP28330 430 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 SHMT2P34897 504 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 CTNNA1P35221 906 aaKnown RBP5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 NSG1P42857 185 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 UQCRFS1P47985 274 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 CCL11P51671 97 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 RPS18P62269 152 aaKnown RBP5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 GSE1Q14687 1217 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC5A12Q1EHB4 618 aa5.91□□□□□ -1.46
LSM3P4-201ENST00000502948 ZRANB3Q5FWF4 1079 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms