RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SERTAD3Q9UJW9 196 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ARL5AQ9Y689 179 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 POLEQ07864 2286 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ANKRD17O75179 2603 aaKnown RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 DIDO1Q9BTC0 2240 aaKnown RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 KLHL33A6NCF5 533 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 STX7O15400 261 aaKnown RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 ALPPP05187 535 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 CBSLP0DN79 551 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 AGXTP21549 392 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 CBSP35520 551 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 TNNT3P45378 269 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 FANCCQ00597 558 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 ELOAQ14241 798 aaKnown RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 LLGL1Q15334 1064 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 MLIPQ5VWP3 458 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 MFSD7Q6UXD7 560 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 CUZD1Q86UP6 607 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 TMEM151BQ8IW70 566 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 CLEC1AQ8NC01 280 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 TFB1MQ8WVM0 346 aaKnown RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 UBE2Q2Q8WVN8 375 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 LINC00615Q96LM1 132 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 FER1L6-AS2Q96M78 137 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 DHRS4Q9BTZ2 278 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 DEF6Q9H4E7 631 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 KLHL8Q9P2G9 620 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 LUC7L2Q9Y383 392 aaKnown RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 PCDHGA10Q9Y5H3 936 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 HEBP2Q9Y5Z4 205 aa14.24□□□□□ -0.13
TRAF4-212ENST00000498540 COPG1Q9Y678 874 aaKnown RBP14.24□□□□□ -0.13
TRAF4-212ENST00000498540 HCRTR1O43613 425 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 SRP72O76094 671 aaKnown RBP14.23□□□□□ -0.13
TRAF4-212ENST00000498540 MBD3O95983 291 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 HADHAP40939 763 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 GLRBP48167 497 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 SSPNQ14714 243 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 SLC18A3Q16572 532 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 DEFB110Q30KQ9 67 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 C1orf189Q5VU69 101 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 Q6ZS92 163 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 ZNF567Q8N184 647 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 OR4K2Q8NGD2 314 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 OR52E1Q8NGJ3 308 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 SLC35G2Q8TBE7 412 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 HM13Q8TCT9 377 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 IP6K3Q96PC2 410 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 FCRL5Q96RD9 977 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 FERD3LQ96RJ6 166 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 CCM2Q9BSQ5 444 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 XKR8Q9H6D3 395 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 ASB8Q9H765 288 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 P4HTMQ9NXG6 502 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 FKBPLQ9UIM3 349 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 PTRH2Q9Y3E5 179 aaKnown RBP14.23□□□□□ -0.13
TRAF4-212ENST00000498540 CSAG2Q9Y5P2 127 aa14.23□□□□□ -0.13
TRAF4-212ENST00000498540 OTOGQ6ZRI0 2925 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 CCDC66A2RUB6 948 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 H3BMH7 237 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 MAP3K7O43318 606 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 CNOT3O75175 753 aaKnown RBP14.22□□□□□ -0.13
TRAF4-212ENST00000498540 HBQ1P09105 142 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 TMEM253P0C7T8 217 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 PYGMP11217 842 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 TNNT1P13805 278 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 PRF1P14222 555 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 FOLR3P41439 243 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 NR2C2P49116 596 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 PRLHRP49683 370 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 MPP3Q13368 585 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 SLC9A5Q14940 896 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 PPP1R32Q7Z5V6 425 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 ZC3H18Q86VM9 953 aaKnown RBP14.22□□□□□ -0.13
TRAF4-212ENST00000498540 GPR135Q8IZ08 494 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 ADGRF3Q8IZF5 1079 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 ZADH2Q8N4Q0 377 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 ST6GALNAC3Q8NDV1 305 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 PHC3Q8NDX5 983 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 RBM41Q96IZ5 413 aaKnown RBP14.22□□□□□ -0.13
TRAF4-212ENST00000498540 GBP5Q96PP8 586 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 FSD1LQ9BXM9 530 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 OR52A5Q9H2C5 316 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 COG4Q9H9E3 785 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 FAM60AQ9NP50 221 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 ACTR10Q9NZ32 417 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 CDYLQ9Y232 598 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 HYOU1Q9Y4L1 999 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 ANKRD12Q6UB98 2062 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 APCP25054 2843 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 DOCK10Q96BY6 2186 aa14.22□□□□□ -0.13
TRAF4-212ENST00000498540 SNRNP200O75643 2136 aaKnown RBP14.21□□□□□ -0.13
TRAF4-212ENST00000498540 C2orf74A8MZ97 194 aa14.21□□□□□ -0.13
TRAF4-212ENST00000498540 PEX12O00623 359 aa14.21□□□□□ -0.13
TRAF4-212ENST00000498540 CST8O60676 142 aa14.21□□□□□ -0.13
TRAF4-212ENST00000498540 OR2B3O76000 313 aa14.21□□□□□ -0.13
TRAF4-212ENST00000498540 IPO13O94829 963 aaKnown RBP14.21□□□□□ -0.13
TRAF4-212ENST00000498540 AGTP01019 485 aa14.21□□□□□ -0.13
TRAF4-212ENST00000498540 CTSBP07858 339 aa14.21□□□□□ -0.13
TRAF4-212ENST00000498540 POU3F2P20265 443 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-212ENST00000498540 CDKN2BP42772 138 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms