RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CROTQ9UKG9 612 aa8.25□□□□□ -1.09
HMGXB4-207ENST00000498212 HEMK1Q9Y5R4 338 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-207ENST00000498212 MRPS18BQ9Y676 258 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-207ENST00000498212 SMG1Q96Q15 3661 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-207ENST00000498212 BAHCC1Q9P281 2608 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 CCDC88CQ9P219 2028 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 CCDC162PA2VCL2 907 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 GSAPA4D1B5 854 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 F8W8V4 182 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 MATN2O00339 956 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 BTN3A1O00481 513 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 LIN7AO14910 233 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 NKX2-8O15522 239 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 NRDCO43847 1150 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TIAF1O95411 115 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ZBTB11O95625 1053 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 GOT2P00505 430 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 OR56A5P0C7T3 313 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ZSCAN5DPP0CG00 497 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ITGB6P18564 788 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TCN2P20062 427 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 CDH3P22223 829 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 F8A1P23610 371 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 OAS2P29728 719 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 RPL22P35268 128 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 GRIA1P42261 906 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 CCR10P46092 362 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PREPP48147 710 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ARCN1P48444 511 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 POLE2P56282 527 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TUBB4BP68371 445 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PRAMEP78395 509 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 BASP1P80723 227 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ACVR1Q04771 509 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TUBB2AQ13885 445 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 BRD3Q15059 726 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 SIX1Q15475 284 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 CRTC2Q53ET0 693 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TMTC4Q5T4D3 741 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PWWP2BQ6NUJ5 590 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 C16orf46Q6P387 395 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 DRICH1Q6PGQ1 229 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 C4orf22Q6V702 233 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 CERS6Q6ZMG9 384 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 NLRP9Q7RTR0 991 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 GSTA5Q7RTV2 222 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PHC3Q8NDX5 983 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TRIM58Q8NG06 486 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 OR52E1Q8NGJ3 308 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 OR4L1Q8NH43 312 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 MAIP1Q8WWC4 291 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ELMO1Q92556 727 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TFGQ92734 400 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 HDAC10Q969S8 669 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ZNF778Q96MU6 729 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 HGH1Q9BTY7 390 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TUBB2BQ9BVA1 445 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 SLC25A18Q9H1K4 315 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TFB2MQ9H5Q4 396 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 MVB12BQ9H7P6 319 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 LHX9Q9NQ69 397 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 C1GALT1Q9NS00 363 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 STARD5Q9NSY2 213 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 GEMIN8Q9NWZ8 242 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 SOHLH2Q9NX45 425 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 SLC2A6Q9UGQ3 507 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 KCND3Q9UK17 655 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 POMT2Q9UKY4 750 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PADI1Q9ULC6 663 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 RIMKLBQ9ULI2 386 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 DRG1Q9Y295 367 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ZKSCAN5Q9Y2L8 839 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 TCAF1Q9Y4C2 921 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PCDHB3Q9Y5E6 796 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PRSS21Q9Y6M0 314 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 PCM1Q15154 2024 aa8.24□□□□□ -1.09
HMGXB4-207ENST00000498212 ATRXP46100 2492 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 SPTBP11277 2137 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 C2orf74A8MZ97 194 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 J3QKU1 62 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 BTN3A3O00478 584 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 TERTO14746 1132 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 SLC28A2O43868 658 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 CPNE3O75131 537 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 KATNA1O75449 491 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 FGGP02679 453 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 PRDX3P30048 256 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 PPARGP37231 505 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 CCZ1BP86790 482 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 CCZ1P86791 482 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 PLOD1Q02809 727 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 PRKG2Q13237 762 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 KCNAB2Q13303 367 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 BOP1Q14137 746 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 GPR19Q15760 415 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 DEFB109BQ30KR1 87 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 SYTL3Q4VX76 610 aa8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 FASTKD1Q53R41 847 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-207ENST00000498212 ATP1A1-AS1Q5TC04 95 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms