RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SFRP1Q8N474 314 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 MINDY1Q8N5J2 469 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 GPR156Q8NFN8 814 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 CCL4L1Q8NHW4 92 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 EEF1AKMT1Q8WVE0 214 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 TFGQ92734 400 aaPredicted RBP19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 KIAA1191Q96A73 305 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 DOLKQ9UPQ8 538 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 DNAJC16Q9Y2G8 782 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 COLEC10Q9Y6Z7 277 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 CABIN1Q9Y6J0 2220 aa19.29■□□□□ 0.68
SCAMP3-209ENST00000497470 ZFC3H1O60293 1989 aaKnown RBP19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 ZBTB14O43829 449 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 GLRA3O75311 464 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 SASH3O75995 380 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 RBP1P09455 135 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 BRAFP15056 766 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 SAT1P21673 171 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 PDHA2P29803 388 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 PBLDP30039 288 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 LIMK1P53667 647 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 AP1S2P56377 157 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 SLC30A9Q6PML9 568 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 CENPLQ8N0S6 344 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 LILRA3Q8N6C8 439 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 FAM46DQ8NEK8 389 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 OR5K2Q8NHB8 316 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 SH3KBP1Q96B97 665 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 TLCD1Q96CP7 247 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 LINGO1Q96FE5 620 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 TSNARE1Q96NA8 513 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 SMC6Q96SB8 1091 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 OSGEPL1Q9H4B0 414 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 EVA1BQ9NVM1 165 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 GRID1Q9ULK0 1009 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 PLEKHM1Q9Y4G2 1056 aa19.28■□□□□ 0.68
SCAMP3-209ENST00000497470 SMIM23A6NLE4 172 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 PDZK1P1A8MUH7 402 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 HMGB1P1B2RPK0 211 aaPredicted RBP19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 CDX4O14627 284 aaPredicted RBP19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 FLRT2O43155 660 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 CATP04040 527 aaKnown RBP19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 PYGBP11216 843 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 MTHFD1P11586 935 aaKnown RBP19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 CD1DP15813 335 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 PNLIPP16233 465 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 KRT4P19013 534 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 HSD17B2P37059 387 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 BNIP3Q12983 259 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 RPE65Q16518 533 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 PLA2G4EQ3MJ16 856 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 TTC23LQ6PF05 361 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 PRR23CQ6ZRP0 262 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 SLC9B2Q86UD5 537 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 VRK3Q8IV63 474 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 NAGSQ8N159 534 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 GOLGA6L1Q8N7Z2 621 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 STAG3L4Q8TBR4 150 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 ZDHHC1Q8WTX9 485 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 NAT14Q8WUY8 206 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 ANKRD49Q8WVL7 239 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 RMDN2Q96LZ7 410 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 GPR78Q96P69 363 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 TRIM54Q9BYV2 358 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 WWP1Q9H0M0 922 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 MED4Q9NPJ6 270 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 TMEM9BQ9NQ34 198 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 IGSF5Q9NSI5 407 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 TMCO1Q9UM00 188 aa19.27■□□□□ 0.68
SCAMP3-209ENST00000497470 RALGAPA1Q6GYQ0 2036 aa19.27■□□□□ 0.67
SCAMP3-209ENST00000497470 A0A1W2PPM1 405 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 FAM221BA6H8Z2 402 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 NOBOXO60393 691 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 GRK6P43250 576 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 PREPP48147 710 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 RPIAP49247 311 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 UBE2IP63279 158 aaKnown RBP19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 SPEM2Q0P670 501 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 GPS2Q13227 327 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 C1orf61Q13536 156 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 ARHGAP19Q14CB8 494 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 CLCA4Q14CN2 919 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 ISCA2Q86U28 154 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 EXOC3L1Q86VI1 746 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 DCUN1D3Q8IWE4 304 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 ARL10Q8N8L6 244 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 BANPQ8N9N5 519 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 MCOLN3Q8TDD5 553 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 RAD51AP1Q96B01 352 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 ATP6V1G3Q96LB4 118 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 INSM2Q96T92 566 aaPredicted RBP19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 MRPL57Q9BQC6 102 aaKnown RBP19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 RAB11FIP5Q9BXF6 653 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 VPS11Q9H270 941 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 STN1Q9H668 368 aaKnown RBP19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 KIR3DX1Q9H7L2 352 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 PARVBQ9HBI1 364 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 PRDM8Q9NQV8 689 aa19.26■□□□□ 0.67
SCAMP3-209ENST00000497470 FAM86C1Q9NVL1 165 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms