RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RPL21P46778 160 aaKnown RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 CFHR1Q03591 330 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 C2orf54Q08AI8 447 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 CRYMQ14894 314 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 PLCL1Q15111 1095 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 TMED2Q15363 201 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 BBS9Q3SYG4 887 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 SPANXN3Q5MJ09 141 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 ZNF470Q6ECI4 717 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 LDB1Q86U70 411 aaPredicted RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 PROSER1Q86XN7 944 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 LILRA3Q8N6C8 439 aaPredicted RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 AGBL5Q8NDL9 886 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 ACVR1CQ8NER5 493 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 LPGAT1Q92604 370 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 TFGQ92734 400 aaPredicted RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 ZDHHC12Q96GR4 267 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 CCDC74BQ96LY2 380 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 SLC46A1Q96NT5 459 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 B3GNT4Q9C0J1 378 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 C20orf96Q9NUD7 363 aaPredicted RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 SLC24A2Q9UI40 661 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 LOXL2Q9Y4K0 774 aa11.18□□□□□ -0.62
HLA-B-254ENST00000497377 CFAP20Q9Y6A4 193 aaKnown RBP11.18□□□□□ -0.62
HLA-B-254ENST00000497377 GOLGA8KD6RF30 607 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 GOLGA8TH3BQL2 631 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 RAD51CO43502 376 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 KDM1AO60341 852 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 SLCO2B1O94956 709 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ANKRD34CP0C6C1 535 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 TYRP1P17643 537 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 AOAHP28039 575 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ACADLP28330 430 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 PDHA2P29803 388 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 CCR7P32248 378 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 CAPZBP47756 277 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 PREPP48147 710 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 EIF3BP55884 814 aaKnown RBP11.17□□□□□ -0.62
HLA-B-254ENST00000497377 CAV1Q03135 178 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 BOP1Q14137 746 aaKnown RBP11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ST3GAL2Q16842 350 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 DUPD1Q68J44 220 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 CENPUQ71F23 418 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ARHGAP22Q7Z5H3 698 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 TBC1D21Q8IYX1 336 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 SLC22A15Q8IZD6 547 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 KIF18AQ8NI77 898 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
HLA-B-254ENST00000497377 GSDMBQ8TAX9 411 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ZNF592Q92610 1267 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 FGF11Q92914 225 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 PRR11Q96HE9 360 aaPredicted RBP11.17□□□□□ -0.62
HLA-B-254ENST00000497377 FERD3LQ96RJ6 166 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 CD180Q99467 661 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 TRIM56Q9BRZ2 755 aaKnown RBP11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ASCL3Q9NQ33 180 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 OGFRQ9NZT2 677 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 POLG2Q9UHN1 485 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 ZMIZ1Q9ULJ6 1067 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 SNX24Q9Y343 169 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 PCDHGA7Q9Y5G6 932 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 MRFAP1Q9Y605 127 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 COMMD10Q9Y6G5 202 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 TEX264Q9Y6I9 313 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 APC2O95996 2303 aa11.17□□□□□ -0.62
HLA-B-254ENST00000497377 PRAMEF33A0A0G2JMD5 474 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 A0A1W2PNU3 283 aaPredicted RBP11.16□□□□□ -0.62
HLA-B-254ENST00000497377 CDRT15L2A8MXV6 281 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 E7ESA3 106 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 MATN2O00339 956 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 TP73O15350 636 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 EIF3HO15372 352 aaKnown RBP eCLIP11.16□□□□□ -0.62
HLA-B-254ENST00000497377 CAPN5O15484 640 aaPredicted RBP11.16□□□□□ -0.62
HLA-B-254ENST00000497377 GPC4O75487 556 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 TNFSF15O95150 251 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 RPN2P04844 631 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 PKMP14618 531 aaKnown RBP11.16□□□□□ -0.62
HLA-B-254ENST00000497377 HSPA14Q0VDF9 509 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 FRG1Q14331 258 aaKnown RBP11.16□□□□□ -0.62
HLA-B-254ENST00000497377 C16orf72Q14CZ0 275 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 BRD3Q15059 726 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 TMEM164Q5U3C3 297 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 DUS1LQ6P1R4 473 aaKnown RBP11.16□□□□□ -0.62
HLA-B-254ENST00000497377 KIAA0408Q6ZU52 694 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 OTOAQ7RTW8 1153 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 CLEC14AQ86T13 490 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 KCNMB4Q86W47 210 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 OOSP2Q86WS3 158 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 CARFQ8N187 725 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 C9orf72Q96LT7 481 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 BIRC8Q96P09 236 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 PHACTR1Q9C0D0 580 aa11.16□□□□□ -0.62
HLA-B-254ENST00000497377 CCDC68Q9H2F9 335 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms