RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ARNTLO00327 626 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ANKRD28O15084 1053 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 HNRNPRO43390 633 aaKnown RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 GPIP06744 558 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 C8GP07360 202 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 AOAHP28039 575 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 AKT1P31749 480 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 VIPR1P32241 457 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 GBX1Q14549 363 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 NRF1Q16656 503 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 LY6G5CQ5SRR4 150 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 NANOGP8Q6NSW7 305 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 TTC23LQ6PF05 361 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 LRRC70Q7Z2Q7 622 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 AMIGO2Q86SJ2 522 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 TCAIMQ8N3R3 496 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 LEMD2Q8NC56 503 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 NANOGQ9H9S0 305 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ARL15Q9NXU5 204 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 UBAP1Q9NZ09 502 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 CD84Q9UIB8 345 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ERVW-1Q9UQF0 538 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 EIF3LQ9Y262 564 aaKnown RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 MANBAO00462 879 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 NUAK1O60285 661 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ULK1O75385 1050 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 FGBP02675 491 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 MPC1LP0DKB6 136 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 BMP2P12643 396 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 SLC2A4P14672 509 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 POLR2EP19388 210 aaKnown RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 IL10P22301 178 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 VARSP26640 1264 aaKnown RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 RPIAP49247 311 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 DCDC1P59894 354 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 AASDHQ4L235 1098 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 UBE2R2Q712K3 238 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 TRIM46Q7Z4K8 759 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 NECAB2Q7Z6G3 386 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 IFNEQ86WN2 208 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 GALNT13Q8IUC8 556 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 HID1Q8IV36 788 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 TMEM74Q96NL1 305 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ZBTB18Q99592 522 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 CIB1Q99828 191 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 HEPHQ9BQS7 1158 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 SLC32A1Q9H598 525 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 MARK1Q9P0L2 795 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 SLAMF8Q9P0V8 285 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 TMPRSS11EQ9UL52 423 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF490Q9ULM2 529 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-220ENST00000496711 PDE10AQ9Y233 779 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 RNF11Q9Y3C5 154 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
GARNL3-220ENST00000496711 CROCCQ5TZA2 2017 aa12.77□□□□□ -0.36
GARNL3-220ENST00000496711 TSPAN11A1L157 253 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 PABPN1LA6NDY0 278 aaKnown RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 LOC730098B7Z3J9 87 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 TNFAIP8O95379 198 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 CLDN9O95484 217 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 SMIM18P0DKX4 95 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 ATP1B2P14415 290 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 OXTRP30559 389 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 HOXA9P31269 272 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 GGT5P36269 586 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 CREB5Q02930 508 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 HSPA14Q0VDF9 509 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 SP140Q13342 867 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 PPIGQ13427 754 aaKnown RBP eCLIP12.77□□□□□ -0.375e-7■■■□□ 14.6
GARNL3-220ENST00000496711 BOP1Q14137 746 aaKnown RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 PLEKHS1Q5SXH7 462 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 CHERPQ8IWX8 916 aaKnown RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 FAM110BQ8TC76 370 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 POF1BQ8WVV4 589 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 USP7Q93009 1102 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 ARMC5Q96C12 935 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 OSBPL11Q9BXB4 747 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 SLC12A9Q9BXP2 914 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 SLC2A11Q9BYW1 496 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 LINC00597Q9H2U6 94 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 PARVBQ9HBI1 364 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 AGPAT4Q9NRZ5 378 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 FARSBQ9NSD9 589 aaKnown RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 ASIC5Q9NY37 505 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 CXXC1Q9P0U4 656 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 KIAA1549LQ6ZVL6 1849 aa12.77□□□□□ -0.37
GARNL3-220ENST00000496711 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.37
GARNL3-220ENST00000496711 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 TCRBV5S2A0A599 114 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 CFAP99D6REC4 459 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 INPP4BO15327 924 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms