RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FNDC5Q8NAU1 212 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 GPR26Q8NDV2 337 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 OR2A12Q8NGT7 310 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 METTL6Q8TCB7 284 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 MCOLN3Q8TDD5 553 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ASZ1Q8WWH4 475 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 DNAJC9Q8WXX5 260 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 SUSD6Q92537 303 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ELMO1Q92556 727 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 SMARCD2Q92925 531 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 TMEM159Q96B96 161 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 NSMCE3Q96MG7 304 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 VPS35Q96QK1 796 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 SLC29A3Q9BZD2 475 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 Q9H521 79 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ACSS2Q9NR19 701 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 BATF3Q9NR55 127 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ARL15Q9NXU5 204 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 GDE1Q9NZC3 331 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 ZIM2Q9NZV7 527 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 C6orf203Q9P0P8 240 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 TRPS1Q9UHF7 1281 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 LEF1Q9UJU2 399 aaPredicted RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 CLEC4EQ9ULY5 219 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 SNX6Q9UNH7 406 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 POMPQ9Y244 141 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 EIF3LQ9Y262 564 aaKnown RBP6.8□□□□□ -1.32
USP39-219ENST00000496047 MED16Q9Y2X0 877 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 DNAJC15Q9Y5T4 150 aa6.8□□□□□ -1.32
USP39-219ENST00000496047 CENPFP49454 3210 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 IGLV3-16A0A075B6K0 115 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CCDC154A6NI56 674 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 C16orf96A6NNT2 1141 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 IQCF5A8MTL0 148 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 A8MX80 341 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 TTC34A8MYJ7 566 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 E2F3O00716 465 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 WNT9AO14904 365 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 SYNCRIPO60506 623 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 RNASEH1O60930 286 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 GMNNO75496 209 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ZNF821O75541 412 aaPredicted RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 STK16O75716 305 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PDE5AO76074 875 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ARHGEF15O94989 841 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 OR4F21O95013 312 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 GUCA1CO95843 209 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 TSPAN12O95859 305 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 NPPAP01160 153 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CATP04040 527 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 JUNP05412 331 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 GNAZP19086 355 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 UGT1A6P19224 532 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ATP6V1C1P21283 382 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 UGT1A1P22309 533 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 UGT1A4P22310 534 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ITGB7P26010 798 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 UGT1A3P35503 534 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 UGT1A5P35504 534 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 NRIP1P48552 1158 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 HSPA7P48741 367 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PNLIPRP1P54315 467 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PSME3P61289 254 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PLOD1Q02809 727 aaPredicted RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 PTSQ03393 145 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ZNF33BQ06732 778 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 TRAP1Q12931 704 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 BNIP2Q12982 314 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ELAVL3Q14576 367 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 AASDHQ4L235 1098 aaPredicted RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 ATP13A5Q4VNC0 1218 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PDCD4Q53EL6 469 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 TCHHL1Q5QJ38 904 aaPredicted RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 GPRC6AQ5T6X5 926 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 FAM46CQ5VWP2 391 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 TMEM198Q66K66 360 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PGM2L1Q6PCE3 622 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 SBSNQ6UWP8 590 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ATG14Q6ZNE5 492 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 RPS27LQ71UM5 84 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 ZNF765Q7L2R6 523 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 UBE2Q1Q7Z7E8 422 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 DHDDSQ86SQ9 333 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CDYL2Q8N8U2 506 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 SNX31Q8N9S9 440 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CHST14Q8NCH0 376 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 DDHD1Q8NEL9 900 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 TMIEQ8NEW7 156 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 VN1R2Q8NFZ6 395 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CXorf40AQ8TE69 158 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CYB5D2Q8WUJ1 264 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 WDR60Q8WVS4 1066 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 RAB7BQ96AH8 199 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ASB9Q96DX5 294 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 NUS1Q96E22 293 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ZNF514Q96K75 400 aaPredicted RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 CLPTM1LQ96KA5 538 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 NSUN5Q96P11 429 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 SMIM14Q96QK8 99 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms