RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-205	ENST00000495653	RAB33B	Q9H082	229 aa		13.62	□□□□□ -0.23
PTPN23-205	ENST00000495653	HRASLS2	Q9NWW9	162 aa		13.62	□□□□□ -0.23
PTPN23-205	ENST00000495653	SLC39A1	Q9NY26	324 aa		13.62	□□□□□ -0.23
PTPN23-205	ENST00000495653	EPHA6	Q9UF33	1036 aa		13.62	□□□□□ -0.23
PTPN23-205	ENST00000495653	GNPTG	Q9UJJ9	305 aa		13.62	□□□□□ -0.23
PTPN23-205	ENST00000495653		B4E171	279 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	KLK10	O43240	276 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	USP1	O94782	785 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	RPS3	P23396	243 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	FMO4	P31512	558 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	TSPAN7	P41732	249 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	TLE3	Q04726	772 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	C2orf54	Q08AI8	447 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	CLN3	Q13286	438 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	BBS9	Q3SYG4	887 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	ZNF789	Q5FWF6	425 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	CACHD1	Q5VU97	1274 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	ANKS6	Q68DC2	871 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	KLHL35	Q6PF15	583 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	CENPU	Q71F23	418 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	PRSS42	Q7Z5A4	293 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	OOSP2	Q86WS3	158 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	LRRC6	Q86X45	466 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	CILP2	Q8IUL8	1156 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	UNC5B	Q8IZJ1	945 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	SPATA4	Q8NEY3	305 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	OR52E1	Q8NGJ3	308 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	OR5AR1	Q8NGP9	310 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	LCN9	Q8WX39	176 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	ZDHHC12	Q96GR4	267 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	C16orf45	Q96MC5	204 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	BIRC8	Q96P09	236 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	TSSK1B	Q9BXA7	367 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	XKR8	Q9H6D3	395 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	MVB12B	Q9H7P6	319 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	APMAP	Q9HDC9	416 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	WDR70	Q9NW82	654 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	CDYL	Q9Y232	598 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	ASF1A	Q9Y294	204 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	CRYL1	Q9Y2S2	319 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	B3GALT1	Q9Y5Z6	326 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	SDK2	Q58EX2	2172 aa		13.61	□□□□□ -0.23
PTPN23-205	ENST00000495653	DSP	P15924	2871 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	NIPSNAP2	O75323	286 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	GPC4	O75487	556 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	APOA4	P06727	396 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	PGAM1	P18669	254 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	POLR2C	P19387	275 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	AOAH	P28039	575 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	ITGA8	P53708	1063 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	SH3BP2	P78314	561 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	MC2R	Q01718	297 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	CTBP1	Q13363	440 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	THOC5	Q13769	683 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	MORF4L2	Q15014	288 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	TGIF1	Q15583	401 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	LONRF1	Q17RB8	773 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	RNF187	Q5TA31	235 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	TMEM164	Q5U3C3	297 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	ARMC6	Q6NXE6	501 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	IGDCC3	Q8IVU1	814 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	DENND6A	Q8IWF6	608 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	SLC22A15	Q8IZD6	547 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	ASZ1	Q8WWH4	475 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	FAM136A	Q96C01	138 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	SNF8	Q96H20	258 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	PPM1M	Q96MI6	270 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	PANX3	Q96QZ0	392 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	TCF12	Q99081	682 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	MAP3K3	Q99759	626 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	SRMS	Q9H3Y6	488 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	ZNF768	Q9H5H4	540 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	SIDT1	Q9NXL6	827 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	ACSL6	Q9UKU0	697 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	LHX6	Q9UPM6	363 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	PCDHGA3	Q9Y5H0	932 aa		13.6	□□□□□ -0.23
PTPN23-205	ENST00000495653	IGHV5-51	A0A0C4DH38	117 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	EFCAB8	A8MWE9	144 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	BTN3A3	O00478	584 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	BTN3A1	O00481	513 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	PFDN6	O15212	129 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TP73	O15350	636 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TOX3	O15405	576 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	SEC31A	O94979	1220 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	S1PR4	O95977	384 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TPBGL	P0DKB5	382 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	SLC1A2	P43004	574 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	RPL21	P46778	160 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	KPNA2	P52292	529 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	PLOD1	Q02809	727 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	FOXM1	Q08050	763 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	ABR	Q12979	859 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	CRYM	Q14894	314 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TMED2	Q15363	201 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	DNAJC21	Q5F1R6	531 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	DCAF12	Q5T6F0	453 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms