RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LATO43561 262 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 NARSO43776 548 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 VPS4BO75351 444 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MTX2O75431 263 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 SUPT3HO75486 399 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 WFS1O76024 890 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 WDR47O94967 919 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 CBX6O95503 412 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 KLF8O95600 359 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 FUCA1P04066 466 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ANXA5P08758 320 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 HOXB2P14652 356 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 NQO1P15559 274 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 ZNF8P17098 575 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 EPHA3P29320 983 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 CASP2P42575 452 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 WASP42768 502 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MAGEA9P43362 315 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 RPIAP49247 311 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ACADVLP49748 655 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ADPRHP54922 357 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 FOXA1P55317 472 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 STARD6P59095 220 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ERVPABLB-1P60509 514 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ARHGAP8P85298 464 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 CDK3Q00526 305 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 PRKCQQ04759 706 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ZNF33BQ06732 778 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 HSPA14Q0VDF9 509 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 SFSWAPQ12872 951 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 KLF10Q13118 480 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 RIPK1Q13546 671 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 STARD3Q14849 445 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 EOGTQ5NDL2 527 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 ZNF648Q5T619 568 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 SDE2Q6IQ49 451 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 Q6ZSR9 355 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 EFL1Q7Z2Z2 1120 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 TRIM46Q7Z4K8 759 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 GOLGA7Q7Z5G4 137 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 TRIM69Q86WT6 500 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 HORMAD1Q86X24 394 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 LRRC56Q8IYG6 542 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 AFAP1L2Q8N4X5 818 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 PAF1Q8N7H5 531 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 L3MBTL4Q8NA19 623 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 DENND6BQ8NEG7 585 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 OR56A3Q8NH54 315 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 HMGCLL1Q8TB92 370 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 TRPC4APQ8TEL6 797 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 FAM3CQ92520 227 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 LRCH3Q96II8 777 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 C3orf30Q96M34 536 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 GUCD1Q96NT3 240 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MIPEPQ99797 713 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 HGH1Q9BTY7 390 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 SLC17A9Q9BYT1 436 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 NUF2Q9BZD4 464 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 OR52A5Q9H2C5 316 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MMADHCQ9H3L0 296 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 SLC32A1Q9H598 525 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 WDR55Q9H6Y2 383 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 RMI1Q9H9A7 625 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MID1IP1Q9NPA3 183 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 SLC52A3Q9NQ40 469 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MBNL1Q9NR56 388 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 FBXL12Q9NXK8 326 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 CD274Q9NZQ7 290 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 USP36Q9P275 1121 aaKnown RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 TAGLN3Q9UI15 199 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 DUSP12Q9UNI6 340 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 PCYT1BQ9Y5K3 369 aaPredicted RBP6.64□□□□□ -1.35
MSH5-217ENST00000494458 KCNE1BA0A087WTH5 132 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 OR2AG2A6NM03 316 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ANKRD65E5RJM6 399 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TOR1BO14657 336 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 GSC2O15499 205 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 MGRN1O60291 552 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 UGDHO60701 494 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 SNX2O60749 519 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 PRAMEF4O60810 478 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 DIAPH2O60879 1101 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 STK16O75716 305 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 RNASEH2AO75792 299 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 POP7O75817 140 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 C1orf105O95561 183 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 OTCP00480 354 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 DNTTP04053 509 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 CEACAM5P06731 702 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ENO1P06733 434 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 ASGR2P07307 311 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 EBLN1P0CF75 366 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ERGP11308 486 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 PCSK2P16519 638 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 ITGB6P18564 788 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 PRPH2P23942 346 aa6.63□□□□□ -1.35
MSH5-217ENST00000494458 TARSP26639 723 aaKnown RBP6.63□□□□□ -1.35
MSH5-217ENST00000494458 PDHA2P29803 388 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms