RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 COG4Q9H9E3 785 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 POLR1BQ9H9Y6 1135 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 PLAC1Q9HBJ0 212 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 ASCL3Q9NQ33 180 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 CATSPERZQ9NTU4 200 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 KCNK4Q9NYG8 393 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 ASIC3Q9UHC3 531 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 ACSL5Q9ULC5 683 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 PSMD13Q9UNM6 376 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 PCDHGA8Q9Y5G5 932 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 USP24Q9UPU5 2620 aa8.57□□□□□ -1.04
ITGB1-217ENST00000494395 MN1Q10571 1320 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 CCDC187A0A096LP49 1063 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 SLC5A10A0PJK1 596 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 SDR42E2A6NKP2 422 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 CDRT15L2A8MXV6 281 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 QSOX1O00391 747 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 ATXN7O15265 892 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 CD3EAPO15446 510 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 TLX3O43711 291 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 BRINP1O60477 761 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 SEC31AO94979 1220 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 VAPBO95292 243 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 VIPP01282 170 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 C9P02748 559 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 MPOP05164 745 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 THRAP10827 490 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 MTHFD1P11586 935 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 PDHA2P29803 388 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 LSSP48449 732 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 GABREP78334 506 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 RPA4Q13156 261 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 GPR18Q14330 331 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 C16orf72Q14CZ0 275 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 MAP9Q49MG5 647 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 FASTKD1Q53R41 847 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 AARS2Q5JTZ9 985 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 IZUMO3Q5VZ72 239 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 HIBCHQ6NVY1 386 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 TMEM71Q6P5X7 295 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 FIGNL1Q6PIW4 674 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 WDR74Q6RFH5 385 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 USP53Q70EK8 1073 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 LDB1Q86U70 411 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 RBM12BQ8IXT5 1001 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 WDR36Q8NI36 951 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 LKAAEAR1Q8TD35 194 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 C16orf45Q96MC5 204 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 KRT12Q99456 494 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 SLC38A3Q99624 504 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 DPYSL5Q9BPU6 564 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 EPB41L1Q9H4G0 881 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 STN1Q9H668 368 aaKnown RBP8.56□□□□□ -1.04
ITGB1-217ENST00000494395 SATB2Q9UPW6 733 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 CDYLQ9Y232 598 aa8.56□□□□□ -1.04
ITGB1-217ENST00000494395 ACACAQ13085 2346 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 MAGEB16A2A368 324 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 GOLGA8KD6RF30 607 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 GOLGA8TH3BQL2 631 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TMX2-CTNND1H3BSU7 103 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 PRMT5O14744 637 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 LIN7AO14910 233 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 PLD2O14939 933 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 HGSO14964 777 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ZW10O43264 779 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 DUX1O43812 170 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 BANF1O75531 89 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 USP1O94782 785 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 FTH1P02794 183 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 FAM157BP0CG42 384 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 OGNP20774 298 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 RPS3P23396 243 aaKnown RBP eCLIP8.55□□□□□ -1.046e-10■□□□□ 8.8
ITGB1-217ENST00000494395 ACADLP28330 430 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CCR7P32248 378 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 HALP42357 657 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 RPL21P46778 160 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CD151P48509 253 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TTPAP49638 278 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ADARP55265 1226 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 C2orf54Q08AI8 447 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 EIF3IQ13347 325 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TRA2AQ13595 282 aaKnown RBP eCLIP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 MORF4L2Q15014 288 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ST3GAL2Q16842 350 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TBC1D25Q3MII6 688 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 C3orf38Q5JPI3 329 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CTSL3PQ5NE16 218 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 DUS1LQ6P1R4 473 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CENPUQ71F23 418 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ARHGAP22Q7Z5H3 698 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 PCGF5Q86SE9 256 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CLEC14AQ86T13 490 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 IGDCC3Q8IVU1 814 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TRIM48Q8IWZ4 208 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CFAP206Q8IYR0 622 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 OR10G6Q8NH81 332 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ZFPM2Q8WW38 1151 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 LPGAT1Q92604 370 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms