RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ST14Q9Y5Y6 855 aa11.15□□□□□ -0.62
MCF2L-231ENST00000494043 TNRC6BQ9UPQ9 1833 aaKnown RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 THADAQ6YHU6 1953 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 WDR91A4D1P6 747 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 A8MT66 165 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 SUPT3HB4E1H0 165 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 DLX3O60479 287 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 SMIM24O75264 130 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 PSIP1O75475 530 aaKnown RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 SUPT3HO75486 399 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 CSF2P04141 144 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 ENO2P09104 434 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 MTHFD2P13995 350 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 NME1P15531 152 aaKnown RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 JUNDP17535 347 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 CYP2A7P20853 494 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 IDSP22304 550 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 ATP5F1P24539 256 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 AK4P27144 223 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 ACADLP28330 430 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 ALDH3A1P30838 453 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 NFKB2Q00653 900 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 SIM2Q14190 667 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 TGFBIQ15582 683 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 PHKG1Q16816 387 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 ZNF542PQ5EBM4 170 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 PEAR1Q5VY43 1037 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 UNC5DQ6UXZ4 953 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 NRROSQ86YC3 692 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 NUDCD3Q8IVD9 361 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 CCL4L1Q8NHW4 92 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 CKAP2Q8WWK9 683 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 CCDC126Q96EE4 140 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 SLC12A9Q9BXP2 914 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 ZDHHC5Q9C0B5 715 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 WWP1Q9H0M0 922 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 TCEAL2Q9H3H9 227 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 RDH14Q9HBH5 336 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 PARVBQ9HBI1 364 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 OXSMQ9NWU1 459 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 SIRPGQ9P1W8 387 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 APOBEC3BQ9UH17 382 aaKnown RBP11.14□□□□□ -0.63
MCF2L-231ENST00000494043 TMCO1Q9UM00 188 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 PSMD13Q9UNM6 376 aa11.14□□□□□ -0.63
MCF2L-231ENST00000494043 A0A1B0GVT2 93 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 NEMP2A6NFY4 417 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 ARHGEF33A8MVX0 844 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 IFRD1O00458 451 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 KLK8O60259 260 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CATP04040 527 aaKnown RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 TPBGLP0DKB5 382 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 GFAPP14136 432 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 RPL10P27635 214 aaKnown RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 HOXD12P35452 270 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 ACTR1BP42025 376 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 DPP6P42658 865 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CTSKP43235 329 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 BDKRB1P46663 353 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 ACTR1AP61163 376 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CDKL1Q00532 357 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 TCEA2Q15560 299 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 PDK4Q16654 411 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 TTC19Q6DKK2 380 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 SYT12Q8IV01 421 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 PDPRQ8NCN5 879 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 FBXO15Q8NCQ5 510 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CFAP61Q8NHU2 1237 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 RAB3IL1Q8TBN0 382 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 SREK1Q8WXA9 508 aaKnown RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 PIGKQ92643 395 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 LRRC61Q9BV99 259 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CAPS2Q9BXY5 557 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 GSDMCQ9BYG8 508 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CAAP1Q9H8G2 361 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 WASH6PQ9NQA3 447 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 PRDM8Q9NQV8 689 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 TMEM74BQ9NUR3 256 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 UTP6Q9NYH9 597 aaKnown RBP11.13□□□□□ -0.63
MCF2L-231ENST00000494043 CD274Q9NZQ7 290 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 TBC1D29Q9UFV1 150 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 PDE10AQ9Y233 779 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
MCF2L-231ENST00000494043 A6NCN8 305 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PABPN1LA6NDY0 278 aaKnown RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 NCF1BA6NI72 391 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 PDZK1P1A8MUH7 402 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 NCF1CA8MVU1 366 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 FFAR2O15552 330 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 SNX2O60749 519 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 TRIM13O60858 407 aa11.12□□□□□ -0.63
MCF2L-231ENST00000494043 H2AFYO75367 372 aaKnown RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 IPO13O94829 963 aaKnown RBP11.12□□□□□ -0.63
MCF2L-231ENST00000494043 C1orf105O95561 183 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms