RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CSO75390 466 aaKnown RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 S1PR4O95977 384 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 VIPP01282 170 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 ESR1P03372 595 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 BRAFP15056 766 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 SSTR1P30872 391 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 MAGEA4P43358 317 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 FASLGP48023 281 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 LSSP48449 732 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 MGAT5Q09328 741 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 CUL1Q13616 776 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 ZNF789Q5FWF6 425 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 METRNLQ641Q3 311 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 DUS1LQ6P1R4 473 aaKnown RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 PCSK4Q6UW60 755 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 ABRAXAS1Q6UWZ7 409 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 WASH2PQ6VEQ5 465 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 NAPRTQ6XQN6 538 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 CEP128Q6ZU80 1094 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 IFT20Q8IY31 132 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 FAM136AQ96C01 138 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 C12orf66Q96MD2 445 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 DPH1Q9BZG8 443 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 POLR1BQ9H9Y6 1135 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 SARS2Q9NP81 518 aaKnown RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 WASH6PQ9NQA3 447 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 ZFATQ9P243 1243 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 CPNE7Q9UBL6 633 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 WDR37Q9Y2I8 494 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 CFAP20Q9Y6A4 193 aaKnown RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 MAST4O15021 2626 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 H3BMM5 538 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 IFRD1O00458 451 aaPredicted RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 PPM1DO15297 605 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 RPLP0P05388 317 aaKnown RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 APOA4P06727 396 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 MTHFD1P11586 935 aaKnown RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 PKMP14618 531 aaKnown RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 ALDH4A1P30038 563 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 MAPK9P45984 424 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 UBE2IP63279 158 aaKnown RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 RPA4Q13156 261 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 CBLBQ13191 982 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 SPIDRQ14159 915 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 FRG1Q14331 258 aaKnown RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 CLCA4Q14CN2 919 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 RPE65Q16518 533 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 MAP9Q49MG5 647 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 ZNF658BQ4V348 819 aaPredicted RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 ARHGAP40Q5TG30 622 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 CNSTQ6PJW8 725 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 XKR5Q6UX68 686 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 ZNF438Q7Z4V0 828 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 SPRED1Q7Z699 444 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 CNTN4Q8IWV2 1026 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 C2CD4AQ8NCU7 369 aaPredicted RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 SLC38A3Q99624 504 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 OR52A5Q9H2C5 316 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 CPNE5Q9HCH3 593 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 POT1Q9NUX5 634 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 KCNK4Q9NYG8 393 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
CTSA-209ENST00000493522 NFU1Q9UMS0 254 aa11.32□□□□□ -0.6
CTSA-209ENST00000493522 KLK10O43240 276 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 ZW10O43264 779 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 GSTA2P09210 222 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 PNLIPP16233 465 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 XRCC1P18887 633 aaPredicted RBP11.31□□□□□ -0.6
CTSA-209ENST00000493522 CHRM3P20309 590 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 PDHA2P29803 388 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 ECHS1P30084 290 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 CCR7P32248 378 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 SLC19A1P41440 591 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
CTSA-209ENST00000493522 CD151P48509 253 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 ADARP55265 1226 aaKnown RBP11.31□□□□□ -0.6
CTSA-209ENST00000493522 OR1D5P58170 312 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 CCL7P80098 99 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 KRT33BQ14525 404 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 PLCL1Q15111 1095 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 AMZ1Q400G9 498 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 TEDDM1Q5T9Z0 273 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 KIAA0408Q6ZU52 694 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 OTOAQ7RTW8 1153 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 ASZ1Q8WWH4 475 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 CDKL2Q92772 493 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 SH3KBP1Q96B97 665 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 GRAMD1AQ96CP6 724 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 ATXN7L3BQ96GX2 97 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 GFM1Q96RP9 751 aaKnown RBP11.31□□□□□ -0.6
CTSA-209ENST00000493522 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
CTSA-209ENST00000493522 NDNQ99608 321 aa11.31□□□□□ -0.6
CTSA-209ENST00000493522 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms