RNA–Protein interactions for RNA: ENST00000493380.5

FRMD4A-208, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-208ENST00000493380 HACD3Q9P035 362 aa13.05□□□□□ -0.32
FRMD4A-208ENST00000493380 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
FRMD4A-208ENST00000493380 SNX7Q9UNH6 387 aa13.05□□□□□ -0.32
FRMD4A-208ENST00000493380 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
FRMD4A-208ENST00000493380 PCM1Q15154 2024 aa13.05□□□□□ -0.32
FRMD4A-208ENST00000493380 OR51F1A6NGY5 319 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 AGAP14A8MT82 685 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 ALOX12BO75342 701 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 VPS4BO75351 444 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 TMEM63AO94886 807 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 RECKO95980 971 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 TPH1P17752 444 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 SLC1A1P43005 524 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 PRLHRP49683 370 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 TBX2Q13207 712 aaPredicted RBP13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 GSE1Q14687 1217 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 LONRF2Q1L5Z9 754 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 ODF2Q5BJF6 829 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 PAPD7Q5XG87 772 aaKnown RBP13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 PIANPQ8IYJ0 282 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 NXPE1Q8N323 547 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 TAB3Q8N5C8 712 aaPredicted RBP13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 CLDN19Q8N6F1 224 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 GALNT11Q8NCW6 608 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 OR52E1Q8NGJ3 308 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 THAP4Q8WY91 577 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 CLIP3Q96DZ5 547 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 FCRL4Q96PJ5 515 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 TRAPPC9Q96Q05 1148 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 FERD3LQ96RJ6 166 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 RANBP9Q96S59 729 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 SPRTNQ9H040 489 aaPredicted RBP13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 COG4Q9H9E3 785 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 SPHK1Q9NYA1 384 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 CRLS1Q9UJA2 301 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 PLAGL1Q9UM63 463 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 VPS4AQ9UN37 437 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 ICKQ9UPZ9 632 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 PCDHGA9Q9Y5G4 932 aaKnown RBP13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
FRMD4A-208ENST00000493380 MYO9AB2RTY4 2548 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 H3BMH7 237 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ZNF749O43361 778 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 LDB2O43679 373 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 KCNJ13O60928 360 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 CLDN1O95832 211 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 OTX2P32243 289 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 GABRA4P48169 554 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 BRD3Q15059 726 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ARMC6Q6NXE6 501 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 KLHL35Q6PF15 583 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 OR5AR1Q8NGP9 310 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 FLVCR1-AS1Q8TAF5 88 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 LCN9Q8WX39 176 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 LINC00615Q96LM1 132 aaPredicted RBP13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 SRPK1Q96SB4 655 aaKnown RBP13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 MESP1Q9BRJ9 268 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 SRMSQ9H3Y6 488 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ACTR5Q9H9F9 607 aaPredicted RBP13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ZNHIT6Q9NWK9 470 aaKnown RBP13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 CIDEBQ9UHD4 219 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 NTNG1Q9Y2I2 539 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 KLHL20Q9Y2M5 609 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 CSAG2Q9Y5P2 127 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
FRMD4A-208ENST00000493380 CRYBG3Q68DQ2 2970 aa13.02□□□□□ -0.32
FRMD4A-208ENST00000493380 A0A0U1RQJ8 604 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 KLF7O75840 302 aaPredicted RBP13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 ZRANB2O95218 330 aaKnown RBP eCLIP13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 APOC2P02655 101 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 RAB40ALP0C0E4 278 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 MC4RP32245 332 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 MAGEA1P43355 309 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 VAV2P52735 878 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 GEMP55040 296 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 PDE1BQ01064 536 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 TRIM14Q14142 442 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 KCTD19Q17RG1 926 aaPredicted RBP13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 ZDHHC20Q5W0Z9 365 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 SERPINA9Q86WD7 417 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 AMER2Q8N7J2 671 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 TC2NQ8N9U0 490 aa13.02□□□□□ -0.33
FRMD4A-208ENST00000493380 ACVR1CQ8NER5 493 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms