RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PDLIM3Q53GG5 364 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ACTBL2Q562R1 376 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WIPI1Q5MNZ9 446 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM201Q5SNT2 666 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 LDLRAP1Q5SW96 308 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NOL9Q5SY16 702 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PRAMEF8Q5VWM4 474 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 METTL21CQ5VZV1 264 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NADSYN1Q6IA69 706 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 OR5M10Q6IEU7 315 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PRSS57Q6UWY2 283 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 IDO2Q6ZQW0 420 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RIPOR1Q6ZS17 1223 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF551Q7Z340 670 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 LHFPL4Q7Z7J7 247 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 HIPK1Q86Z02 1210 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KBTBD2Q8IY47 623 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RP9Q8TA86 221 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZCCHC10Q8TBK6 192 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ASAP3Q8TDY4 903 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ERLEC1Q96DZ1 483 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RRNAD1Q96FB5 475 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C5orf34Q96MH7 638 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF578Q96N58 590 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 LRRC37BQ96QE4 947 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TAAR6Q96RI8 345 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PCDHB18PQ96TA0 734 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM246Q9BRR3 403 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM175Q9BSA9 504 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TUBGCP2Q9BSJ2 902 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C17orf80Q9BSJ5 609 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 LRRC1Q9BTT6 524 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 DSCC1Q9BVC3 393 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 YIPF3Q9GZM5 350 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SLC22A4Q9H015 551 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NAPBQ9H115 298 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PCDHAC1Q9H158 963 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RNPEPL1Q9HAU8 725 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TIMMDC1Q9NPL8 285 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SEMA5BQ9P283 1151 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RAPGEFL1Q9UHV5 662 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 DAPK2Q9UIK4 370 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SLC12A4Q9UP95 1085 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 HPSEQ9Y251 543 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF175Q9Y473 711 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GMPPBQ9Y5P6 360 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 UBN2Q6ZU65 1347 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF541Q9H0D2 1346 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PNMA6EA0A0J9YXQ4 647 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 EDDM13A0A1B0GTR0 161 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM149AA5PLN7 773 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 EFCAB10A6NFE3 127 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CD8B2A6NJW9 211 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WASHC1A8K0Z3 465 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WASH4PA8MWX3 477 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM114B3SHH9 223 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WASH3PC4AMC7 463 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SNAP23O00161 211 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WNT9AO14904 365 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ANKRD28O15084 1053 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KIAA0391O15091 583 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 BET1O15155 118 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 EIF3HO15372 352 aaKnown RBP eCLIP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 INSIG1O15503 277 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GPAA1O43292 621 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ADCY6O43306 1168 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CCNT2O60583 730 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 HCN1O60741 890 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 VPS26AO75436 327 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WBP4O75554 376 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 UBOX5O94941 541 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SLC16A8O95907 504 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 AHSGP02765 367 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 UGT2B4P06133 528 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RHOP08100 348 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ANXA5P08758 320 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CPA3P15088 417 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ADRA2CP18825 462 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CDH2P19022 906 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CD247P20963 164 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FGFR3P22607 806 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ARNTP27540 789 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GSTM2P28161 218 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MSX1P28360 303 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 LTBRP36941 435 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CD79BP40259 229 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MC3RP41968 323 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CHRNA4P43681 627 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PREPP48147 710 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RAB28P51157 221 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 P2RY4P51582 365 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF135P52742 658 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RAD23BP54727 409 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NRG3P56975 720 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 BNC1Q01954 994 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 IFFO1Q0D2I5 559 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RESTQ13127 1097 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ETFDHQ16134 617 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 IFI16Q16666 785 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C9orf50Q5SZB4 431 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms