RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TNFRSF12AQ9NP84 129 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 POLMQ9NP87 494 aaPredicted RBP22.36■■□□□ 1.17
USF3-203ENST00000491165 HACD3Q9P035 362 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 AP4S1Q9Y587 144 aa22.36■■□□□ 1.17
USF3-203ENST00000491165 OR51F1A6NGY5 319 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 GPC4O75487 556 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 VIPR1P32241 457 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 TPMTP51580 245 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 MAP7Q14244 749 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 LIPIQ6XZB0 460 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 HSD11B1LQ7Z5J1 315 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 FRMD1Q8N878 549 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 EME1Q96AY2 570 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 CCDC167Q9P0B6 97 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 FNDC3AQ9Y2H6 1198 aaKnown RBP22.35■■□□□ 1.17
USF3-203ENST00000491165 COQ6Q9Y2Z9 468 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 FRYLO94915 3013 aa22.35■■□□□ 1.17
USF3-203ENST00000491165 C2orf81A6NN90 581 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 FBP2O00757 339 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 LPOP22079 712 aaPredicted RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 ACVR1Q04771 509 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 GK3PQ14409 553 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 PPP1R3AQ16821 1122 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 ISLR2Q6UXK2 745 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 RBM44Q6ZP01 1051 aaKnown RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 RPS27LQ71UM5 84 aaKnown RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 CBARPQ8N350 705 aaPredicted RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 NMD3Q96D46 503 aaKnown RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 PHF21BQ96EK2 531 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 SPAG4Q9NPE6 437 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 ETAA1Q9NY74 926 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 SNRPB2P08579 225 aaKnown RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 PRSS56P0CW18 603 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 RHDQ02161 417 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 TRAP1Q12931 704 aaKnown RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.34■■□□□ 1.17
USF3-203ENST00000491165 HECTD2Q5U5R9 776 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 ERAP2Q6P179 960 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 GALNT7Q86SF2 657 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 TSTD1Q8NFU3 115 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 GANCQ8TET4 914 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 HDAC10Q969S8 669 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 PBXIP1Q96AQ6 731 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 UBXN10Q96LJ8 280 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 SLC25A23Q9BV35 468 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 TPSD1Q9BZJ3 242 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 PCDHAC1Q9H158 963 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 NLE1Q9NVX2 485 aaPredicted RBP22.34■■□□□ 1.17
USF3-203ENST00000491165 CD84Q9UIB8 345 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 FKBPLQ9UIM3 349 aa22.34■■□□□ 1.17
USF3-203ENST00000491165 PLXNA2O75051 1894 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 TMEM221A6NGB7 291 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 M0R296 226 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 PAPSS2O95340 614 aaPredicted RBP22.33■■□□□ 1.17
USF3-203ENST00000491165 BPIP17213 487 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 ACSL1P33121 698 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 ADPRHP54922 357 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 NADK2Q4G0N4 442 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 PAOXQ6QHF9 649 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 PGBD3Q8N328 593 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 METTL25Q8N6Q8 603 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 GPR26Q8NDV2 337 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 CDKN2AIPNLQ96HQ2 116 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 PRPF18Q99633 342 aaKnown RBP22.33■■□□□ 1.17
USF3-203ENST00000491165 TRMOQ9BU70 441 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 PTTG2Q9NZH5 202 aa22.33■■□□□ 1.17
USF3-203ENST00000491165 H0YJX3 145 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 GAPDHSO14556 408 aaPredicted RBP22.33■■□□□ 1.16
USF3-203ENST00000491165 MMP20O60882 483 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 ACADMP11310 421 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 CYP2A6P11509 494 aaPredicted RBP22.33■■□□□ 1.16
USF3-203ENST00000491165 ATP6V1B1P15313 513 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 ZNF26P17031 533 aaPredicted RBP22.33■■□□□ 1.16
USF3-203ENST00000491165 CA5AP35218 305 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 ETV3P41162 512 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 STC1P52823 247 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 IYDQ6PHW0 289 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 Q6ZVL8 140 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 CILP2Q8IUL8 1156 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 OR14C36Q8NHC7 312 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 GRIP2Q9C0E4 1043 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 GSTO2Q9H4Y5 243 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 USP36Q9P275 1121 aaKnown RBP22.33■■□□□ 1.16
USF3-203ENST00000491165 VWA7Q9Y334 891 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 TRAF6Q9Y4K3 522 aa22.33■■□□□ 1.16
USF3-203ENST00000491165 ANKRD33BA6NCL7 494 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 MRASO14807 208 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 VILLO15195 856 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 STX7O15400 261 aaKnown RBP22.32■■□□□ 1.16
USF3-203ENST00000491165 PLRG1O43660 514 aaKnown RBP22.32■■□□□ 1.16
USF3-203ENST00000491165 ELFN1P0C7U0 828 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 IMPDH1P20839 514 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 PSMA3P25788 255 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 CREB5Q02930 508 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 ARHGEF7Q14155 803 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 SPNS2Q8IVW8 549 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 ANKRD49Q8WVL7 239 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 LPGAT1Q92604 370 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 RAB7BQ96AH8 199 aa22.32■■□□□ 1.16
USF3-203ENST00000491165 DTNBP1Q96EV8 351 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms