RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 MLPHQ9BV36 600 aaPredicted RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TDRD1Q9BXT4 1180 aaKnown RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 CRISPLD1Q9H336 500 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 MYOZ2Q9NPC6 264 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 CCDC59Q9P031 241 aaKnown RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 SNX7Q9UNH6 387 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 PCDHGB6Q9Y5F9 930 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TAF1LQ8IZX4 1826 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 CASP9P55211 416 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 KLHL12Q53G59 568 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 NRARPQ7Z6K4 114 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 SLC30A2Q9BRI3 323 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 SPRTNQ9H040 489 aaPredicted RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 RANGRFQ9HD47 186 aaPredicted RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 NECTIN3Q9NQS3 549 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 INTS6Q9UL03 887 aaKnown RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 COL24A1Q17RW2 1714 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 H0YC42 278 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 ACOX3O15254 700 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 HBP1O60381 514 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 VIPP01282 170 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 KRT20P35900 424 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TWF1Q12792 350 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TECRLQ5HYJ1 363 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 SPATA19Q7Z5L4 167 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 LYSMD2Q8IV50 215 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 FUNDC1Q8IVP5 155 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TMEM132CQ8N3T6 1108 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 HASPINQ8TF76 798 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 CENPIQ92674 756 aaPredicted RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 UCK2Q9BZX2 261 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 HOXD1Q9GZZ0 328 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TNFRSF12AQ9NP84 129 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 UXTQ9UBK9 157 aaPredicted RBP11.33□□□□□ -0.6
PCSK9-202ENST00000490692 TNFSF13BQ9Y275 285 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 KCTD3Q9Y597 815 aa11.33□□□□□ -0.6
PCSK9-202ENST00000490692 JRKO75564 520 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 SCO1O75880 301 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 G6PDP11413 515 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 GPX3P22352 226 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 GRM5P41594 1212 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 PRIM2P49643 509 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 AGTR2P50052 363 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 HMGCS1Q01581 520 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 GRSF1Q12849 480 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 CDK5R2Q13319 367 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 SOWAHCQ53LP3 525 aaPredicted RBP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 ZNF678Q5SXM1 525 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 OVOS1Q6IE37 1185 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 SVOPLQ8N434 492 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 ATP6V0D2Q8N8Y2 350 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 NPLOC4Q8TAT6 608 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 TMEM125Q96AQ2 219 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 EXOC2Q96KP1 924 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 BPIFA1Q9NP55 256 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 MRPS7Q9Y2R9 242 aaKnown RBP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 FABP12A6NFH5 140 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 H3BUI4 141 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 NUPL2O15504 423 aaKnown RBP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 OR2B3O76000 313 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 FHP07954 510 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 RPS3P23396 243 aaKnown RBP eCLIP11.32□□□□□ -0.68e-13■■■■□ 23.6
PCSK9-202ENST00000490692 NFE2L1Q14494 772 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 TAZQ16635 292 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 TOR1AIP2Q8NFQ8 470 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 NUDT8Q8WV74 236 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 OSMRQ99650 979 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 CATSPERZQ9NTU4 200 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 ZNF490Q9ULM2 529 aaPredicted RBP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 CTDSP2O14595 271 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 PTTG1O95997 202 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 F9P00740 461 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 TCF3P15923 654 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 SPNP16150 400 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 MAGEA3P43357 314 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 C1DQ13901 141 aaKnown RBP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 TSTQ16762 297 aaKnown RBP11.32□□□□□ -0.6
PCSK9-202ENST00000490692 UNC50Q53HI1 259 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 COMMD3Q9UBI1 195 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 TMCC3Q9ULS5 477 aa11.32□□□□□ -0.6
PCSK9-202ENST00000490692 AGAP5A6NIR3 686 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 C1QAP02745 245 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 C7P10643 843 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 UBL4AP11441 157 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 IL7P13232 177 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 NPR3P17342 541 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 CLDN10P78369 228 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 STARD3Q14849 445 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 PTGR1Q14914 329 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
PCSK9-202ENST00000490692 BLOC1S3Q6QNY0 202 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms