RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 CD151P48509 253 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 FOXM1Q08050 763 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 VAC14Q08AM6 782 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 RPA4Q13156 261 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 KIAA1614Q5VZ46 1190 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 INO80CQ6PI98 192 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-214ENST00000490398 MCUQ8NE86 351 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 ACVR1CQ8NER5 493 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 ZFPM2Q8WW38 1151 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 OR6C1Q96RD1 312 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 PILRAQ9UKJ1 303 aa17.63■□□□□ 0.41
COL9A3-214ENST00000490398 STMND1H3BQB6 276 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 AP3B1O00203 1094 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 IFRD1O00458 451 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 BTN3A1O00481 513 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 TOX3O15405 576 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 GSTM1P09488 218 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 FOLR1P15328 257 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 NELFEP18615 380 aaKnown RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 CD82P27701 267 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 MAGEA3P43357 314 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 RAB15P59190 212 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 GSTM4Q03013 218 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 ZNF789Q5FWF6 425 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 CTSL3PQ5NE16 218 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 DNTTIP2Q5QJE6 756 aaKnown RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 RNASEH2BQ5TBB1 312 aaKnown RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 CCDC81Q6ZN84 652 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 OOSP2Q86WS3 158 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 LMNTD1Q8N9Z9 388 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 LCN9Q8WX39 176 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 SLC41A2Q96JW4 573 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 SIGLEC10Q96LC7 697 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 NAPGQ99747 312 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-214ENST00000490398 CARD6Q9BX69 1037 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 ASPSCR1Q9BZE9 553 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 ANAPC5Q9UJX4 755 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 PLAGL1Q9UM63 463 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 ICKQ9UPZ9 632 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 HEBP2Q9Y5Z4 205 aa17.62■□□□□ 0.41
COL9A3-214ENST00000490398 CACNA1GO43497 2377 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 GOLGA6L10A0A0M3HER8 536 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 QSOX1O00391 747 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 PRMT5O14744 637 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-214ENST00000490398 RAD1O60671 282 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 GPC4O75487 556 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 BANF1O75531 89 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 TIAF1O95411 115 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 EBLN1P0CF75 366 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 MLNP12872 115 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 NDUFS1P28331 727 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 UCNP55089 124 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 HSPA14Q0VDF9 509 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 PPP1R7Q15435 360 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 ANKRD20A4Q4UJ75 823 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 SYTL3Q4VX76 610 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 MANEAQ5SRI9 462 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 KIAA0930Q6ICG6 404 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-214ENST00000490398 CASC4Q6P4E1 433 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 CEACAM20Q6UY09 585 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 KLHL7Q8IXQ5 586 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 UNC5BQ8IZJ1 945 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 OTUD6BQ8N6M0 293 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 SNRNP27Q8WVK2 155 aaKnown RBP17.61■□□□□ 0.41
COL9A3-214ENST00000490398 LPGAT1Q92604 370 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 ZNF669Q96BR6 464 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-214ENST00000490398 BIRC8Q96P09 236 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 TTC1Q99614 292 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 TFB2MQ9H5Q4 396 aaKnown RBP17.61■□□□□ 0.41
COL9A3-214ENST00000490398 GALPQ9UBC7 116 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 CIDEBQ9UHD4 219 aa17.61■□□□□ 0.41
COL9A3-214ENST00000490398 PIKFYVEQ9Y2I7 2098 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 ZCWPW2A0A1B0GU75 182 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 SDR42E2A6NKP2 422 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 NDUFS3O75489 264 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 STK17BO94768 372 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 DLGAP3O95886 979 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 IVDP26440 423 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 AOAHP28039 575 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 FMO4P31512 558 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 TTPAP49638 278 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 CYP4F2P78329 520 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 SARNPP82979 210 aaKnown RBP17.6■□□□□ 0.41
COL9A3-214ENST00000490398 PTK6Q13882 451 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 TYSND1Q2T9J0 566 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 AARS2Q5JTZ9 985 aaKnown RBP17.6■□□□□ 0.41
COL9A3-214ENST00000490398 KLHL35Q6PF15 583 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 CENPUQ71F23 418 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 ADGRF3Q8IZF5 1079 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 GRK7Q8WTQ7 553 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 UBXN4Q92575 508 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 FAM136AQ96C01 138 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 PWWP2AQ96N64 755 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 KLHL25Q9H0H3 589 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 SRMSQ9H3Y6 488 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 MVB12BQ9H7P6 319 aa17.6■□□□□ 0.41
COL9A3-214ENST00000490398 XAB2Q9HCS7 855 aaKnown RBP17.6■□□□□ 0.41
COL9A3-214ENST00000490398 PCYOX1Q9UHG3 505 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms