RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 KLF11O14901 512 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 CD52P31358 61 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 FAAH2Q6GMR7 532 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 MECRQ9BV79 373 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 NMUR2Q9GZQ4 415 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 MOCS1Q9NZB8 636 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 BAIAP2Q9UQB8 552 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3DA0A087WVF3 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3IA0A087WXS9 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3EA0A087X179 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3KA0A087X1G2 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3FA6NER0 549 aaPredicted RBP8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3LB9A6J9 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3HP0C7X1 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF823P16415 610 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 ACSL1P33121 698 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 BEX3Q00994 111 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 BLMHQ13867 455 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3GQ6DHY5 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3CQ6IPX1 549 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D3Q8IZP1 549 aaPredicted RBP8.72□□□□□ -1.01
LSAMP-205ENST00000490035 TNFRSF25Q93038 417 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 RFT1Q96AA3 541 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 MOAP1Q96BY2 351 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 SDHAF3Q9NRP4 125 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 IMP3Q9NV31 184 aaKnown RBP8.72□□□□□ -1.01
LSAMP-205ENST00000490035 ELOVL2Q9NXB9 296 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 GIN1Q9NXP7 522 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 MAT2BQ9NZL9 334 aa8.72□□□□□ -1.01
LSAMP-205ENST00000490035 NEDD8-MDP1E9PL57 170 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 KAT7O95251 611 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 RAB36O95755 333 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 C7P10643 843 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 DNASE1L1P49184 302 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 IQCCQ4KMZ1 466 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 MSANTD2Q6P1R3 559 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 HID1Q8IV36 788 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF548Q8NEK5 533 aaPredicted RBP8.71□□□□□ -1.01
LSAMP-205ENST00000490035 TRNT1Q96Q11 434 aaKnown RBP8.71□□□□□ -1.01
LSAMP-205ENST00000490035 TCF25Q9BQ70 676 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 HEPHQ9BQS7 1158 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 CCM2Q9BSQ5 444 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 SERINC1Q9NRX5 453 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 CNTN3Q9P232 1028 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 P2RX2Q9UBL9 471 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 PPIEQ9UNP9 301 aaKnown RBP8.71□□□□□ -1.01
LSAMP-205ENST00000490035 SMIM28A0A1B0GU29 152 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 TMEM150BA6NC51 233 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 PIGRP01833 764 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 COL6A1P12109 1028 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 NRG3P56975 720 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 GSTM4Q03013 218 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 AADACL2Q6P093 401 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 XKRXQ6PP77 449 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 ZDHHC21Q8IVQ6 265 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 PNPLA2Q96AD5 504 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 CYP2S1Q96SQ9 504 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 SP140LQ9H930 580 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 TAS2R1Q9NYW7 299 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 SPIN1Q9Y657 262 aaPredicted RBP8.71□□□□□ -1.01
LSAMP-205ENST00000490035 IL7RP16871 459 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 MARCKSL1P49006 195 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 TARBP2Q15633 366 aaKnown RBP8.71□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF567Q8N184 647 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 SMG7Q92540 1137 aaKnown RBP8.71□□□□□ -1.01
LSAMP-205ENST00000490035 EPYCQ99645 322 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 SLC29A3Q9BZD2 475 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 Q9Y3F1 56 aa8.71□□□□□ -1.01
LSAMP-205ENST00000490035 IRF6O14896 467 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 TFPIP10646 304 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF30P17039 623 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 SLC1A2P43004 574 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 FUT2Q10981 343 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 GET4Q7L5D6 327 aaPredicted RBP8.71□□□□□ -1.02
LSAMP-205ENST00000490035 AMIGO2Q86SJ2 522 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 NPAS4Q8IUM7 802 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 PPM1MQ96MI6 270 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 SLC22A4Q9H015 551 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 TCF7L1Q9HCS4 588 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 PTPRHQ9HD43 1115 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 ARHGEF4Q9NR80 690 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 TEX13CA0A0J9YWL9 993 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 LRATO95237 230 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 PTPN2P17706 415 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 NT5EP21589 574 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 MAPK3P27361 379 aaPredicted RBP8.71□□□□□ -1.02
LSAMP-205ENST00000490035 AKT2P31751 481 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 CAPZA1P52907 286 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 FSTL1Q12841 308 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.02
LSAMP-205ENST00000490035 LBX2Q6XYB7 198 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 HPS6Q86YV9 775 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 CFAP206Q8IYR0 622 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 SLC13A3Q8WWT9 602 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 RGMAQ96B86 450 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 NXNL1Q96CM4 212 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 POLMQ9NP87 494 aaPredicted RBP8.71□□□□□ -1.02
LSAMP-205ENST00000490035 IKZF2Q9UKS7 526 aa8.71□□□□□ -1.02
LSAMP-205ENST00000490035 NUP98P52948 1817 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms