RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 A0A1B0GVM2 712 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM221AA4D161 298 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 OR2A25A4D2G3 310 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 A8MUA0 341 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 G3V2T6 193 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 BTN3A1O00481 513 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PRMT5O14744 637 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 DSCR3O14972 297 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 KHNYNO15037 678 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 KCNQ2O43526 872 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 AIREO43918 545 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TULP3O75386 442 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PSMD10O75832 226 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PDE9AO76083 593 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PGLSO95336 258 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TSPAN12O95859 305 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TRUB2O95900 331 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 AHSGP02765 367 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 C2P06681 752 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SERPINF2P08697 491 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 HDCP19113 662 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ITGALP20701 1170 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 CPN2P22792 545 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC6A2P23975 617 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 MYL9P24844 172 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 MAOBP27338 520 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TGFBR2P37173 567 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PIK3CBP42338 1070 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 CCR10P46092 362 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GIPRP48546 466 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 CENPAP49450 140 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 LIG4P49917 911 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GBX2P52951 348 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 LIMK2P53671 638 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PER3P56645 1201 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 EEFSECP57772 596 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC35A2P78381 396 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GSTO1P78417 241 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RBP5P82980 135 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GRM1Q13255 1194 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SLAMF1Q13291 335 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ASAH1Q13510 395 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF273Q14593 569 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TSC22D1Q15714 1073 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GRK1Q15835 563 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SMTNL2Q2TAL5 461 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RFX4Q33E94 735 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 COQ5Q5HYK3 327 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ZBTB41Q5SVQ8 909 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF470Q6ECI4 717 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GLYATQ6IB77 296 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RETSATQ6NUM9 610 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TXNDC11Q6PKC3 985 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM270Q6UE05 265 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 NPNTQ6UXI9 565 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 CMC1Q7Z7K0 106 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SYVN1Q86TM6 617 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 BBS7Q8IWZ6 715 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PHC2Q8IXK0 858 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 VWA5B2Q8N398 1253 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SVOPLQ8N434 492 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ZBTB44Q8NCP5 570 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SETD9Q8NE22 299 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 OR7G3Q8NG95 312 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 OR8K3Q8NH51 312 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 WDR48Q8TAF3 677 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 STYXQ8WUJ0 223 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 IPCEF1Q8WWN9 437 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ST8SIA4Q92187 359 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 FCGR1BQ92637 280 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TMBIM1Q969X1 311 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 C18orf25Q96B23 403 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 HYLS1Q96M11 299 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TEKT5Q96M29 485 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ZSWIM3Q96MP5 696 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 GPR137Q96N19 417 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RBBP8Q99708 897 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RBM4BQ9BQ04 359 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC30A2Q9BRI3 323 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PELOQ9BRX2 385 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 RBM4Q9BWF3 364 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SPATA9Q9BWV2 254 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 AMBRA1Q9C0C7 1298 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PITHD1Q9GZP4 211 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC22A4Q9H015 551 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF576Q9H609 170 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 CATSPERBQ9H7T0 1116 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SP110Q9HB58 689 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ACOT13Q9NPJ3 140 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 PCDHB16Q9NRJ7 776 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM49BQ9NUQ9 324 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 ING3Q9NXR8 418 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 DPP3Q9NY33 737 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 COL20A1Q9P218 1284 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 CPNE7Q9UBL6 633 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SRP68Q9UHB9 627 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC23A1Q9UHI7 598 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 TLK1Q9UKI8 766 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 MAGED2Q9UNF1 606 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 KLHL20Q9Y2M5 609 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms