RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CCDC50Q8IVM0 306 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 TMEM151BQ8IW70 566 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 CFAP206Q8IYR0 622 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 NXPE1Q8N323 547 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 Q8NA96 180 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 OR4E2Q8NGC2 313 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 CCDC110Q8TBZ0 833 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 HM13Q8TCT9 377 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 THAP4Q8WY91 577 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 MR1Q95460 341 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 LRFN5Q96NI6 719 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 PITPNM3Q9BZ71 974 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 COG4Q9H9E3 785 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 PCMTD2Q9NV79 361 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 IMPACTQ9P2X3 320 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 REXO2Q9Y3B8 237 aaKnown RBP11.42□□□□□ -0.58
ACTN4-206ENST00000489451 SEC16AO15027 2179 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 TRBV5-4A0A0C4DH59 114 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 C5orf60A6NFR6 353 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 MEN1O00255 615 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 BTN3A1O00481 513 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 AGFG2O95081 481 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 CTSBP07858 339 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 SLC35G4P0C7Q5 338 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 PVRP15151 417 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 GNLYP22749 145 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 CTNNA1P35221 906 aaKnown RBP11.41□□□□□ -0.58
ACTN4-206ENST00000489451 LMAN1P49257 510 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 ITGA1P56199 1179 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 KCTD11Q693B1 232 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 CARFQ8N187 725 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 ZBTB2Q8N680 514 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 ENDOVQ8N8Q3 282 aaKnown RBP11.41□□□□□ -0.58
ACTN4-206ENST00000489451 OR52E1Q8NGJ3 308 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 ALG3Q92685 438 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
ACTN4-206ENST00000489451 DNAJC1Q96KC8 554 aaKnown RBP11.41□□□□□ -0.58
ACTN4-206ENST00000489451 BAG1Q99933 345 aaPredicted RBP11.41□□□□□ -0.58
ACTN4-206ENST00000489451 KLHL25Q9H0H3 589 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 ING2Q9H160 280 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 PCDHGA9Q9Y5G4 932 aaKnown RBP11.41□□□□□ -0.58
ACTN4-206ENST00000489451 DUSP10Q9Y6W6 482 aa11.41□□□□□ -0.58
ACTN4-206ENST00000489451 C17orf113A0A1B0GUU1 675 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 SOWAHDA6NJG2 315 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 C2orf81A6NN90 581 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 TMEM150CB9EJG8 249 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 KCNN4O15554 427 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ANXA9O76027 345 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 RAB40ALP0C0E4 278 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 MSL3P1P0C860 447 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 TPBGLP0DKB5 382 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 RBP3P10745 1247 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ATP1B2P14415 290 aaPredicted RBP11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PRDX3P30048 256 aaKnown RBP11.4□□□□□ -0.58
ACTN4-206ENST00000489451 CDC25BP30305 580 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 MC4RP32245 332 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PTPN7P35236 360 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PREPP48147 710 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 GABRA4P48169 554 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ARL4DP49703 201 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 CCL11P51671 97 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 RPS15P62841 145 aaKnown RBP11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ZIC1Q15915 447 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PTCHD3Q3KNS1 767 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 CDHR3Q6ZTQ4 885 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 SNX20Q7Z614 316 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 TICAM1Q8IUC6 712 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PIANPQ8IYJ0 282 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 SYTL1Q8IYJ3 562 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ADGRF3Q8IZF5 1079 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PHC3Q8NDX5 983 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ACVR1CQ8NER5 493 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 FDCSPQ8NFU4 85 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 OR8K5Q8NH50 307 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 FLVCR1-AS1Q8TAF5 88 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 CPT1CQ8TCG5 803 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 SPATA13Q96N96 652 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 TRAPPC9Q96Q05 1148 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 SLC25A23Q9BV35 468 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 NUDT9Q9BW91 350 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 NLNQ9BYT8 704 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 OSBPL8Q9BZF1 889 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 XKR8Q9H6D3 395 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 ARNT2Q9HBZ2 717 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 FAM60AQ9NP50 221 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 C1GALT1Q9NS00 363 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 SOHLH2Q9NX45 425 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 LUZP4Q9P127 313 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 CRLS1Q9UJA2 301 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 MAP4K5Q9Y4K4 846 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PCDHA3Q9Y5H8 950 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 PRSS21Q9Y6M0 314 aa11.4□□□□□ -0.58
ACTN4-206ENST00000489451 CCDC66A2RUB6 948 aa11.39□□□□□ -0.59
ACTN4-206ENST00000489451 KLHL33A6NCF5 533 aa11.39□□□□□ -0.59
ACTN4-206ENST00000489451 H7C0S8 307 aa11.39□□□□□ -0.59
ACTN4-206ENST00000489451 PYGMP11217 842 aa11.39□□□□□ -0.59
ACTN4-206ENST00000489451 CDH3P22223 829 aa11.39□□□□□ -0.59
ACTN4-206ENST00000489451 ACRV1P26436 265 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms