RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TSSK4Q6SA08 328 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 CRLF3Q8IUI8 442 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 FAM174AQ8TBP5 190 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 PPP4R1Q8TF05 950 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 GRAMD1AQ96CP6 724 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 MOCOSQ96EN8 888 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 CNDP1Q96KN2 507 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 SLC6A18Q96N87 628 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 OR2M4Q96R27 311 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 EGFL8Q99944 293 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 CARS2Q9HA77 564 aaKnown RBP20.42■□□□□ 0.86
SND1-214ENST00000489417 KLC4Q9NSK0 619 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 KLQ9UEF7 1012 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 PABPN1LA6NDY0 278 aaKnown RBP20.41■□□□□ 0.86
SND1-214ENST00000489417 MEI4A8MW99 385 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 LAMTOR5O43504 91 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 SIX3O95343 332 aaPredicted RBP20.41■□□□□ 0.86
SND1-214ENST00000489417 GUCA1CO95843 209 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 CATP04040 527 aaKnown RBP20.41■□□□□ 0.86
SND1-214ENST00000489417 EEF1DP29692 281 aaKnown RBP20.41■□□□□ 0.86
SND1-214ENST00000489417 RPIAP49247 311 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 CDKL1Q00532 357 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 CDKL4Q5MAI5 379 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 METRNLQ641Q3 311 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 CFAP61Q8NHU2 1237 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 MCOLN3Q8TDD5 553 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 PDXPQ96GD0 296 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 SORT1Q99523 831 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 ELAC2Q9BQ52 826 aaKnown RBP20.41■□□□□ 0.86
SND1-214ENST00000489417 OR52A5Q9H2C5 316 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 AASDHPPTQ9NRN7 309 aa20.41■□□□□ 0.86
SND1-214ENST00000489417 LRRC14BA6NHZ5 514 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 ARHGEF33A8MVX0 844 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 SUPT7LO94864 414 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 HIST1H2AGP0C0S8 130 aaPredicted RBP20.4■□□□□ 0.86
SND1-214ENST00000489417 THEGLP0DJG4 465 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 TDGF1P13385 188 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 HIST1H2ADP20671 130 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 CCR10P46092 362 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 FNTBP49356 437 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 OVGP1Q12889 678 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 PTK2BQ14289 1009 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 SULT1C3Q6IMI6 304 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 ATG14Q6ZNE5 492 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 FRMD7Q6ZUT3 714 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 PDZD3Q86UT5 571 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 WDR5BQ86VZ2 330 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 HIST1H2AHQ96KK5 128 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 HSPA12BQ96MM6 686 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 HIST1H2AJQ99878 128 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 H2AFJQ9BTM1 129 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 C1QTNF3Q9BXJ4 246 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 GSTO2Q9H4Y5 243 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 GPR27Q9NS67 375 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 ACSL5Q9ULC5 683 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 KCNK6Q9Y257 313 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 PLEKHM1Q9Y4G2 1056 aa20.4■□□□□ 0.86
SND1-214ENST00000489417 RPS17P08708 135 aaKnown RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 ANXA5P08758 320 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 TROVE2P10155 538 aaKnown RBP eCLIP20.39■□□□□ 0.85
SND1-214ENST00000489417 MAP4P27816 1152 aaKnown RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 ACADLP28330 430 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 AGTR2P50052 363 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 AP1S2P56377 157 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 SRP54P61011 504 aaKnown RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 NAA20P61599 178 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 ALG11Q2TAA5 492 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 ARL13AQ5H913 290 aaPredicted RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 ANKS6Q68DC2 871 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 LSMEM2Q8N112 164 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 SLC22A18ASQ8N1D0 253 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 TSACCQ96A04 125 aaPredicted RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 RHBDF1Q96CC6 855 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 KLHDC7BQ96G42 594 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 TRMOQ9BU70 441 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 ARL15Q9NXU5 204 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 WWOXQ9NZC7 414 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 EIF2B4Q9UI10 523 aaKnown RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 PTBP2Q9UKA9 531 aaKnown RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 TNPO3Q9Y5L0 923 aaKnown RBP20.39■□□□□ 0.85
SND1-214ENST00000489417 SLCO1B1Q9Y6L6 691 aa20.39■□□□□ 0.85
SND1-214ENST00000489417 PRR19A6NJB7 356 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 SNX3O60493 162 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 SNUPNO95149 360 aaKnown RBP20.38■□□□□ 0.85
SND1-214ENST00000489417 TGDSO95455 350 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 CHRNGP07510 517 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 BDKRB1P46663 353 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 FBXO48Q5FWF7 155 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.38■□□□□ 0.85
SND1-214ENST00000489417 UNC5DQ6UXZ4 953 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 MBOAT1Q6ZNC8 495 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 RPS27LQ71UM5 84 aaKnown RBP20.38■□□□□ 0.85
SND1-214ENST00000489417 RD3Q7Z3Z2 195 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 SPATA21Q7Z572 469 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 PIGWQ7Z7B1 504 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 TCAIMQ8N3R3 496 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 UBTD2Q8WUN7 234 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 ZDHHC5Q9C0B5 715 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 WWP1Q9H0M0 922 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 OSGEPL1Q9H4B0 414 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms