RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FGF14Q92915 247 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 LINGO1Q96FE5 620 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 LRRC3BQ96PB8 259 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 MYCBPQ99417 103 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 HGH1Q9BTY7 390 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 EFHD1Q9BUP0 239 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TRIM54Q9BYV2 358 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PLA2G2FQ9BZM2 168 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SHCBP1LQ9BZQ2 653 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TRIM15Q9C019 465 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 KLHL4Q9C0H6 718 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 Q9H521 79 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SUV39H2Q9H5I1 410 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 RUBCNLQ9H714 662 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 AKTIPQ9H8T0 292 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 IL26Q9NPH9 171 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 C8orf4Q9NR00 106 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 KCTD5Q9NXV2 234 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 OBP2AQ9NY56 170 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 CD274Q9NZQ7 290 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ZIM2Q9NZV7 527 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ABCD2Q9UBJ2 740 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 CROTQ9UKG9 612 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SLC8A2Q9UPR5 921 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 OARD1Q9Y530 152 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PCDHGA7Q9Y5G6 932 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ACTL7AQ9Y615 435 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 CACNA1HO95180 2353 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 KANSL1LA0AUZ9 987 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TSPAN11A1L157 253 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 MAGEA13PA6NCF6 341 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 NPEPPSL1A6NEC2 478 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 H3BM21 787 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 H3BNX3 289 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CDC7O00311 574 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 GAPDHSO14556 408 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PIP5K1BO14986 540 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ANGPT2O15123 496 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SLC16A5O15375 505 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 NIPSNAP2O75323 286 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 KATNA1O75449 491 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ZNF821O75541 412 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PDE5AO76074 875 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 AP2A2O94973 939 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ASLP04424 464 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PIM1P11309 404 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 HSD17B1P14061 328 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 VCLP18206 1134 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 HNF1BP35680 557 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ZXDAP98168 799 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CYP4F8P98187 520 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 RHDQ02161 417 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CEACAM7Q14002 265 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 RCAN2Q14206 197 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 RPS6KA2Q15349 733 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PPP1R3AQ16821 1122 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CARD16Q5EG05 197 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TCHHL1Q5QJ38 904 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ATXN7L2Q5T6C5 722 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 GPRC6AQ5T6X5 926 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CLEC6AQ6EIG7 209 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TANGO2Q6ICL3 276 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SBSNQ6UWP8 590 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 NEK10Q6ZWH5 1172 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 MTSS1LQ765P7 747 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 GET4Q7L5D6 327 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 BMP8AQ7Z5Y6 402 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SERPINA9Q86WD7 417 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 PDSS2Q86YH6 399 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 DDIASQ8IXT1 998 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 AHI1Q8N157 1196 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ZBTB2Q8N680 514 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SIDT2Q8NBJ9 832 aaKnown RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 DNAJB8Q8NHS0 232 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 WFDC5Q8TCV5 224 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TRPC4APQ8TEL6 797 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 EEF1AKMT1Q8WVE0 214 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ING5Q8WYH8 240 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SMARCD2Q92925 531 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 COL26A1Q96A83 441 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ZUFSPQ96AP4 578 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ELSPBP1Q96BH3 223 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CCDC124Q96CT7 223 aaKnown RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TUBGCP3Q96CW5 907 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 RSPRY1Q96DX4 576 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 UNKQ9C0B0 810 aaKnown RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ASB8Q9H765 288 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SLC2A4RGQ9NR83 387 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 HEBP1Q9NRV9 189 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TDP1Q9NUW8 608 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 AIG1Q9NVV5 245 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-207ENST00000489357 ASIC5Q9NY37 505 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CCDC167Q9P0B6 97 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 TMEM181Q9P2C4 612 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 CD300AQ9UGN4 299 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 SUN2Q9UH99 717 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 POLG2Q9UHN1 485 aa8.31□□□□□ -1.08
VTI1A-207ENST00000489357 RAPGEFL1Q9UHV5 662 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms