RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 EXTL1Q92935 676 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 PBKQ96KB5 322 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 AP1M1Q9BXS5 423 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 MVB12BQ9H7P6 319 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 HELZ2Q9BYK8 2649 aaKnown RBP24.3■■□□□ 1.48
HMGN1-217ENST00000489072 SLC5A10A0PJK1 596 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 SPAG6O75602 509 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 TIAF1O95411 115 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 OR56A5P0C7T3 313 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 MGAT1P26572 445 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 NMBRP28336 390 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 NPY2RP49146 381 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 VPS41P49754 854 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 TERF1P54274 439 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 ABHD18Q0P651 414 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 PRKG2Q13237 762 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 TUBB3Q13509 450 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 MAP7Q14244 749 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 KMT5CQ86Y97 462 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 RASGRP3Q8IV61 690 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 SLC35F6Q8N357 371 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 ZNF843Q8N446 348 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 TTC1Q99614 292 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 HGH1Q9BTY7 390 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 IL22Q9GZX6 179 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 TRIT1Q9H3H1 467 aaKnown RBP24.29■■□□□ 1.48
HMGN1-217ENST00000489072 SRMSQ9H3Y6 488 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 TFB2MQ9H5Q4 396 aaKnown RBP24.29■■□□□ 1.48
HMGN1-217ENST00000489072 GPN2Q9H9Y4 310 aaPredicted RBP24.29■■□□□ 1.48
HMGN1-217ENST00000489072 BFARQ9NZS9 450 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 POMT2Q9UKY4 750 aa24.29■■□□□ 1.48
HMGN1-217ENST00000489072 BHMG1C9JSJ3 638 aaPredicted RBP24.28■■□□□ 1.48
HMGN1-217ENST00000489072 BTN3A3O00478 584 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 KIAA0754O94854 1291 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 ITGB2P05107 769 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 ACADLP28330 430 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 STAT5AP42229 794 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 CDK16Q00536 496 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 KCNJ11Q14654 390 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.28■■□□□ 1.48
HMGN1-217ENST00000489072 LRRC8BQ6P9F7 803 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 PPP1R3BQ86XI6 285 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 D2HGDHQ8N465 521 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 ESX1Q8N693 406 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 EXD3Q8N9H8 876 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 GALNT6Q8NCL4 622 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 OR5AR1Q8NGP9 310 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 LKAAEAR1Q8TD35 194 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 XKR8Q9H6D3 395 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 CATSPERZQ9NTU4 200 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 SYBUQ9NX95 663 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 IL17BQ9UHF5 180 aa24.28■■□□□ 1.48
HMGN1-217ENST00000489072 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.27■■□□□ 1.48
HMGN1-217ENST00000489072 BTN3A1O00481 513 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 KRT14P02533 472 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 ITGB6P18564 788 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 HSD11B2P80365 405 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 C19orf57Q0VDD7 668 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 GPS1Q13098 491 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 TBR1Q16650 682 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 C6orf15Q6UXA7 325 aaPredicted RBP24.27■■□□□ 1.48
HMGN1-217ENST00000489072 COG1Q8WTW3 980 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 MAGOHBQ96A72 148 aaKnown RBP24.27■■□□□ 1.48
HMGN1-217ENST00000489072 SLC45A3Q96JT2 553 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 PDE7BQ9NP56 450 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 RARRES3Q9UL19 164 aa24.27■■□□□ 1.48
HMGN1-217ENST00000489072 AP3B1O00203 1094 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 CD3EAPO15446 510 aaKnown RBP24.26■■□□□ 1.47
HMGN1-217ENST00000489072 ZBTB11O95625 1053 aaPredicted RBP24.26■■□□□ 1.47
HMGN1-217ENST00000489072 CCR7P32248 378 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 MAGEA6P43360 314 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 ARL4DP49703 201 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 ACY1Q03154 408 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 PRKAA1Q13131 559 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 CYP1B1Q16678 543 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 SYTL3Q4VX76 610 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 ANKRD22Q5VYY1 191 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 PWWP2BQ6NUJ5 590 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 CES3Q6UWW8 571 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 ADGRF3Q8IZF5 1079 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 CARFQ8N187 725 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 KIAA1143Q96AT1 154 aaPredicted RBP24.26■■□□□ 1.47
HMGN1-217ENST00000489072 KIFC1Q9BW19 673 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 FGF21Q9NSA1 209 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 LNPEPQ9UIQ6 1025 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 ICKQ9UPZ9 632 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 RPS6KL1Q9Y6S9 549 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 SPTA1P02549 2419 aa24.26■■□□□ 1.47
HMGN1-217ENST00000489072 SNRNP200O75643 2136 aaKnown RBP24.26■■□□□ 1.47
HMGN1-217ENST00000489072 GSAPA4D1B5 854 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 SLC9B1P1A6NJY1 282 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 IQCF5A8MTL0 148 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 TPBGLP0DKB5 382 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 F8A1P23610 371 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 ARNTP27540 789 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 COILP38432 576 aaPredicted RBP24.25■■□□□ 1.47
HMGN1-217ENST00000489072 CSE1LP55060 971 aaKnown RBP24.25■■□□□ 1.47
HMGN1-217ENST00000489072 GPR19Q15760 415 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 AARS2Q5JTZ9 985 aaKnown RBP24.25■■□□□ 1.47
HMGN1-217ENST00000489072 CYB5D1Q6P9G0 228 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms