RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 POLR1CO15160 346 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-218ENST00000489037 MAP3K7O43318 606 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 ATP1A2P50993 1020 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 EIF3BP55884 814 aaKnown RBP13.91□□□□□ -0.18
BRCA1-218ENST00000489037 DR1Q01658 176 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 FOXM1Q08050 763 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 HSPA14Q0VDF9 509 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 CLN3Q13286 438 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 MANEAQ5SRI9 462 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 ANKS6Q68DC2 871 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 ZFAND4Q86XD8 727 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 GABPB2Q8TAK5 448 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-218ENST00000489037 TRIT1Q9H3H1 467 aaKnown RBP13.91□□□□□ -0.18
BRCA1-218ENST00000489037 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 FOXJ2Q9P0K8 574 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 POLG2Q9UHN1 485 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 B3GALT1Q9Y5Z6 326 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 RPS6KL1Q9Y6S9 549 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 WDFY3Q8IZQ1 3526 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 BPTFQ12830 3046 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 SLC5A10A0PJK1 596 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 TLCD2A6NGC4 264 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 H3BMM5 538 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 SMAPO00193 183 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 RPN2P04844 631 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 OGNP20774 298 aaKnown RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 RPS3P23396 243 aaKnown RBP eCLIP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 CSE1LP55060 971 aaKnown RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 CXADRP78310 365 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 PRKG2Q13237 762 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 ANKRD20A4Q4UJ75 823 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 ZNF658BQ4V348 819 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 RNASEH2BQ5TBB1 312 aaKnown RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 IZUMO3Q5VZ72 239 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 NEPROQ6NW34 567 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 XKR5Q6UX68 686 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 CCDC81Q6ZN84 652 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 GPR155Q7Z3F1 870 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 HOOK3Q86VS8 718 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 TBC1D21Q8IYX1 336 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 CARFQ8N187 725 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 BMPERQ8N8U9 685 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 SIDT2Q8NBJ9 832 aaKnown RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 CALML6Q8TD86 181 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 KLHL6Q8WZ60 621 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 STAMBPL1Q96FJ0 436 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 FCRL3Q96P31 734 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 CCNL2Q96S94 520 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 HGH1Q9BTY7 390 aa13.9□□□□□ -0.18
BRCA1-218ENST00000489037 TFB2MQ9H5Q4 396 aaKnown RBP13.9□□□□□ -0.18
BRCA1-218ENST00000489037 DSPP15924 2871 aaKnown RBP13.89□□□□□ -0.19
BRCA1-218ENST00000489037 GSAPA4D1B5 854 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.89□□□□□ -0.19
BRCA1-218ENST00000489037 GOLGA8KD6RF30 607 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 GOLGA8TH3BQL2 631 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 NDC80O14777 642 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 KIF1CO43896 1103 aaKnown RBP13.89□□□□□ -0.19
BRCA1-218ENST00000489037 USP1O94782 785 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
BRCA1-218ENST00000489037 CDH3P22223 829 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 FMO4P31512 558 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 CCR7P32248 378 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 SHMT2P34897 504 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 PTGIRP43119 386 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 IL11RAQ14626 422 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 LONRF1Q17RB8 773 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 TMTC4Q5T4D3 741 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 TTC23LQ6PF05 361 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 NAPRTQ6XQN6 538 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 OTOAQ7RTW8 1153 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 AMIGO1Q86WK6 493 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 LMNTD2Q8IXW0 634 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 KRT222Q8N1A0 295 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 IL22RA1Q8N6P7 574 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 ZSCAN1Q8NBB4 408 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 OR52E1Q8NGJ3 308 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 MAP3K3Q99759 626 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 CTRCQ99895 268 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 NAT9Q9BTE0 207 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 CCDC68Q9H2F9 335 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 PDE7BQ9NP56 450 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 TDRKHQ9Y2W6 561 aaKnown RBP13.89□□□□□ -0.19
BRCA1-218ENST00000489037 MRFAP1Q9Y605 127 aa13.89□□□□□ -0.19
BRCA1-218ENST00000489037 IQCF5A8MTL0 148 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 E5RI56 91 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ZBTB11O95625 1053 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ESR1P03372 595 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 NELFEP18615 380 aaKnown RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ARNTP27540 789 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 AOAHP28039 575 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ACADLP28330 430 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 MAGEA3P43357 314 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ARCN1P48444 511 aaKnown RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ETF1P62495 437 aaKnown RBP13.88□□□□□ -0.19
BRCA1-218ENST00000489037 ACY1Q03154 408 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
BRCA1-218ENST00000489037 MORF4L2Q15014 288 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms