RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CXorf40BQ96DE9 158 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 SCYL1Q96KG9 808 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 FOPNLQ96NB1 174 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 SMC6Q96SB8 1091 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 TMBIM4Q9HC24 238 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 SCHIP1Q9P0W5 487 aaPredicted RBP12.04□□□□□ -0.48
TRAIP-209ENST00000488860 ASF1AQ9Y294 204 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 DNAH14Q0VDD8 3507 aa12.04□□□□□ -0.48
TRAIP-209ENST00000488860 CABIN1Q9Y6J0 2220 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 GPR179Q6PRD1 2367 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 PABPN1LA6NDY0 278 aaKnown RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 EIF3FO00303 357 aaPredicted RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 OPA1O60313 960 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 LRP3O75074 770 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 SPAG7O75391 227 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 WISP3O95389 354 aaPredicted RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 TSPAN12O95859 305 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 MTHFD1P11586 935 aaKnown RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 CCNFP41002 786 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 GLRBP48167 497 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 MAZP56270 477 aaKnown RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 DLG1Q12959 904 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 BIRC2Q13490 618 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 RPE65Q16518 533 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 AGAP9Q5VTM2 703 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 KLC3Q6P597 504 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 FRA10AC1Q70Z53 315 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 UBE2R2Q712K3 238 aaPredicted RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 ASCL5Q7RTU5 278 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 CCDC91Q7Z6B0 441 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 PLD6Q8N2A8 252 aaKnown RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 SDR16C5Q8N3Y7 309 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 SLC25A45Q8N413 288 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 KYQ8NBH2 561 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 MAPK15Q8TD08 544 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 ACMSDQ8TDX5 336 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 PGM2Q96G03 612 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 FERD3LQ96RJ6 166 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 INSM2Q96T92 566 aaPredicted RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 HGH1Q9BTY7 390 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 DERL2Q9GZP9 239 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 TMEM9BQ9NQ34 198 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 RXFP3Q9NSD7 469 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 IGSF5Q9NSI5 407 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 NLGN3Q9NZ94 848 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 IKZF3Q9UKT9 509 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 NOVA2Q9UNW9 492 aaKnown RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 TDRKHQ9Y2W6 561 aaKnown RBP12.03□□□□□ -0.48
TRAIP-209ENST00000488860 CSNK1G3Q9Y6M4 447 aa12.03□□□□□ -0.48
TRAIP-209ENST00000488860 A6NCN8 305 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 PROB1E7EW31 1015 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 CDC7O00311 574 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 COPEO14579 308 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ZBTB14O43829 449 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 GLRA3O75311 464 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 KLHL2O95198 593 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 SYF2O95926 243 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 CD1DP15813 335 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 TFEBP19484 476 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 CSRP3P50461 194 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ATP6V0D1P61421 351 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 TSNQ15631 228 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 FAM83EQ2M2I3 478 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 TSNAXIP1Q2TAA8 658 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 INAVAQ3KP66 663 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 C6orf132Q5T0Z8 1188 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 CAPRIN2Q6IMN6 1127 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ABRAXAS1Q6UWZ7 409 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 UNC5DQ6UXZ4 953 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 WASH2PQ6VEQ5 465 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 NEK10Q6ZWH5 1172 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 KANSL1Q7Z3B3 1105 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 NAGSQ8N159 534 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 EID2Q8N6I1 236 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 PHC3Q8NDX5 983 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 OR5AR1Q8NGP9 310 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 SLC37A2Q8TED4 501 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 TFGQ92734 400 aaPredicted RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 APOPT1Q96IL0 206 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 IQCGQ9H095 443 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 TRIT1Q9H3H1 467 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 STN1Q9H668 368 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ALG9Q9H6U8 611 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 NMRAL1Q9HBL8 299 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 WASH6PQ9NQA3 447 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 DNAAF2Q9NVR5 837 aaKnown RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ZNF358Q9NW07 568 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 SENP1Q9P0U3 644 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.02□□□□□ -0.49
TRAIP-209ENST00000488860 CIDEBQ9UHD4 219 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ADAMTS6Q9UKP5 1117 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 RNF112Q9ULX5 631 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 HEBP2Q9Y5Z4 205 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 OTOGLQ3ZCN5 2332 aa12.02□□□□□ -0.49
TRAIP-209ENST00000488860 ARID1BQ8NFD5 2236 aaPredicted RBP12.01□□□□□ -0.49
TRAIP-209ENST00000488860 KIR2DS5A0A0G2JLQ3 304 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms