RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	DBN1	Q16643	649 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	FAM199X	Q6PEV8	388 aa	Predicted RBP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	HOOK3	Q86VS8	718 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	AMIGO1	Q86WK6	493 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	PIANP	Q8IYJ0	282 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	RNF10	Q8N5U6	811 aa	Known RBP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	CLDN19	Q8N6F1	224 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	SPC24	Q8NBT2	197 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	TFG	Q92734	400 aa	Predicted RBP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	ZNF501	Q96CX3	271 aa	Predicted RBP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	HES6	Q96HZ4	224 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	PPM1M	Q96MI6	270 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	TTC1	Q99614	292 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	OR52A5	Q9H2C5	316 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	TFB2M	Q9H5Q4	396 aa	Known RBP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	SYTL2	Q9HCH5	934 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	POMT2	Q9UKY4	750 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	FARSA	Q9Y285	508 aa	Known RBP	12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	BTRC	Q9Y297	605 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	BOD1L1	Q8NFC6	3051 aa		12.1	□□□□□ -0.47
SREBF1-215	ENST00000487401	CCDC78	A2IDD5	438 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	MROH6	A6NGR9	719 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	C2orf74	A8MZ97	194 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	GOLGA6L6	A8MZA4	724 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401		E7EVH7	732 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401		F8W8V4	182 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	QSOX1	O00391	747 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	ARHGAP6	O43182	974 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	RFPL1	O75677	317 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	IFNB1	P01574	187 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	FTH1	P02794	183 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	MSN	P26038	577 aa	Known RBP	12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	PDHA2	P29803	388 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	PRDX3	P30048	256 aa	Known RBP	12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	FDFT1	P37268	417 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	NSG1	P42857	185 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	PMS2	P54278	862 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	GSDMD	P57764	484 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	ITIH4	Q14624	930 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	SYTL3	Q4VX76	610 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	CCDC38	Q502W7	563 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	SEL1L2	Q5TEA6	688 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	LYPLAL1	Q5VWZ2	237 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	PPP1R21	Q6ZMI0	780 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	SYVN1	Q86TM6	617 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	TMEM135	Q86UB9	458 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	TMEM139	Q8IV31	216 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	TEX19	Q8NA77	164 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	OR52E1	Q8NGJ3	308 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	OR52K1	Q8NGK4	314 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	THAP4	Q8WY91	577 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	ATG4A	Q8WYN0	398 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	CPT1B	Q92523	772 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	ELMO1	Q92556	727 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	HGH1	Q9BTY7	390 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	TLR10	Q9BXR5	811 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	SLC7A5P2	Q9GIP4	190 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	EPN3	Q9H201	632 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	XKR8	Q9H6D3	395 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	ASH1L	Q9NR48	2969 aa	Known RBP	12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	LATS2	Q9NRM7	1088 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	SERTAD3	Q9UJW9	196 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401	ZNF148	Q9UQR1	794 aa		12.09	□□□□□ -0.47
SREBF1-215	ENST00000487401		A0A0U1RQJ8	604 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	CCDC162P	A2VCL2	907 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	ERI2	A8K979	691 aa	Known RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	TMEM150C	B9EJG8	249 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	MEN1	O00255	615 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	BTN3A3	O00478	584 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	BTN3A1	O00481	513 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	LIN7A	O14910	233 aa	Predicted RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	OR56A5	P0C7T3	313 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	CYP2A7	P20853	494 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	RPS18	P62269	152 aa	Known RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	PLOD1	Q02809	727 aa	Predicted RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	CDH17	Q12864	832 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	KLRB1	Q12918	225 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	BOP1	Q14137	746 aa	Known RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	BRD3	Q15059	726 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	UGT8	Q16880	541 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	ZNF658B	Q4V348	819 aa	Predicted RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	TCTN3	Q6NUS6	607 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	ASB18	Q6ZVZ8	466 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	MICALCL	Q6ZW33	695 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	GAS2L3	Q86XJ1	694 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	UBE2Q2	Q8WVN8	375 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	N4BP2L2	Q92802	583 aa	Predicted RBP	12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	CLIP3	Q96DZ5	547 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	LRFN5	Q96NI6	719 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	RUFY1	Q96T51	708 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	TSGA10	Q9BZW7	698 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	CHST8	Q9H2A9	424 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	ETNK1	Q9HBU6	452 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	ACTR10	Q9NZ32	417 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	TLK1	Q9UKI8	766 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	ASF1A	Q9Y294	204 aa		12.08	□□□□□ -0.48
SREBF1-215	ENST00000487401	TP53TG5	Q9Y2B4	290 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms