RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ETV3P41162 512 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 YAP1P46937 504 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 HTR6P50406 440 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 SEC13P55735 322 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 LSM3P62310 102 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CYP2A13Q16696 494 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 FAM219BQ5XKK7 198 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 NXPE1Q8N323 547 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ROPN1LQ96C74 230 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 AURKBQ96GD4 344 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 MGME1Q9BQP7 344 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 A0A0G2JN53 185 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 RHOP08100 348 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ANXA4P09525 319 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ATXN1LP0C7T5 689 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 HOXD9P28356 352 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 KCNC1P48547 511 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 RPL34P49207 117 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 SIM2Q14190 667 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 PAGE2BQ5JRK9 111 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 FGD3Q5JSP0 725 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 C6orf136Q5SQH8 315 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ADHFE1Q8IWW8 467 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CHST14Q8NCH0 376 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ITCHQ96J02 903 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CEP19Q96LK0 163 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CNOT6Q9ULM6 557 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 DRGXA6NNA5 263 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 LEFTY1O75610 366 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 GSTM1P09488 218 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TMED10P49755 219 aaKnown RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 RPS14P62263 151 aaKnown RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 KIAA1324Q6UXG2 1013 aaKnown RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ADCK1Q86TW2 530 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ADGRG2Q8IZP9 1017 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 SHKBP1Q8TBC3 707 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 NRG4Q8WWG1 115 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 C3orf30Q96M34 536 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 RHBGQ9H310 441 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 OAZ3Q9UMX2 235 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 DHRS7Q9Y394 339 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 SHROOM3Q8TF72 1996 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3DA0A087WVF3 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 A0A087WXM4 84 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3IA0A087WXS9 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3EA0A087X179 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3KA0A087X1G2 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ELOVL7A1L3X0 281 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3FA6NER0 549 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3LB9A6J9 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 EI24O14681 340 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ARPC2O15144 300 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3HP0C7X1 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 IGFBP4P22692 258 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 SLC26A3P40879 764 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 PPIGQ13427 754 aaKnown RBP eCLIP12.98□□□□□ -0.335e-19■■□□□ 12
HMGN1-216ENST00000486741 TP53BP2Q13625 1128 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 HERC3Q15034 1050 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ATP13A5Q4VNC0 1218 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 LIN52Q52LA3 116 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3GQ6DHY5 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3CQ6IPX1 549 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 PLD3Q8IV08 490 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D3Q8IZP1 549 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 FUBP1Q96AE4 644 aaKnown RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 PHF24Q9UPV7 400 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ARNTP27540 789 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 CDH15P55291 814 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 INO80DQ53TQ3 878 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 CHST15Q7LFX5 561 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D21Q8IYX1 336 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 IRF7Q92985 503 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 SLC47A1Q96FL8 570 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 GSTO2Q9H4Y5 243 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 REEP1Q9H902 201 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 PLAC1Q9HBJ0 212 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 ZNF334Q9HCZ1 680 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 AHSPQ9NZD4 102 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
HMGN1-216ENST00000486741 SAMHD1Q9Y3Z3 626 aaKnown RBP12.98□□□□□ -0.33
HMGN1-216ENST00000486741 SLC31A1O15431 190 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 NOBOXO60393 691 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 NR4A1P22736 598 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 HMGCLP35914 325 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 ALDH6A1Q02252 535 aaKnown RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 CPTPQ5TA50 214 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 SLC8B1Q6J4K2 584 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 CAPN13Q6MZZ7 669 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 NCEH1Q6PIU2 408 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 PHYKPLQ8IUZ5 450 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms