RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 EPHA2P29317 976 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 KRT20P35900 424 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 CTSKP43235 329 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 PPP3CCP48454 512 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 ARSDP51689 593 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 HMGCS2P54868 508 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 KEAP1Q14145 624 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 STARD3Q14849 445 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 MAD2L1BPQ15013 274 aaPredicted RBP10.46□□□□□ -0.73
CCDC171-208ENST00000486641 KYAT1Q16773 422 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 DCAF15Q66K64 600 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 PLPPR4Q7Z2D5 763 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 OR8J3Q8NGG0 315 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 SIGLEC11Q96RL6 698 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 COQ7Q99807 217 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 COLEC11Q9BWP8 271 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 ACTL8Q9H568 366 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 CCNB1IP1Q9NPC3 277 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 BTBD3Q9Y2F9 522 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 HSPE1-MOB4S4R3N1 261 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 PHIPQ8WWQ0 1821 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 LOC100506127A0A0U1RQW1 187 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 ELOVL7A1L3X0 281 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 FAM25AB3EWG3 89 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 FAM25CB3EWG5 89 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 FAM25GB3EWG6 89 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 SUPT3HB4E1H0 165 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 WNT10BO00744 389 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 ARHGAP33O14559 1287 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 ENPP3O14638 875 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 VTNP04004 478 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 UROSP10746 265 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 G6PDP11413 515 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 HTR2BP41595 481 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 MAGEA11P43364 429 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 SLC15A1P46059 708 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 BAG6P46379 1132 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 IRF3Q14653 427 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 CARD16Q5EG05 197 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 C9orf57Q5W0N0 161 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 ANKS6Q68DC2 871 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF517Q6ZMY9 492 aaPredicted RBP10.46□□□□□ -0.74
CCDC171-208ENST00000486641 Q6ZSR9 355 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 NOXA1Q86UR1 476 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 NLGN1Q8N2Q7 840 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 TCAIMQ8N3R3 496 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 FBXO39Q8N4B4 442 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 RHEBL1Q8TAI7 183 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 NACC2Q96BF6 587 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 CDCA5Q96FF9 252 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 TEPSINQ96N21 525 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 PHOX2BQ99453 314 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 MYOCQ99972 504 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 WDCPQ9H6R7 721 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 ACOXLQ9NUZ1 547 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 DCAF13Q9NV06 445 aaKnown RBP10.46□□□□□ -0.74
CCDC171-208ENST00000486641 RBM22Q9NW64 420 aaKnown RBP eCLIP10.46□□□□□ -0.74
CCDC171-208ENST00000486641 STMN3Q9NZ72 180 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 IKZF3Q9UKT9 509 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 GRIP1Q9Y3R0 1128 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 PEX16Q9Y5Y5 336 aa10.46□□□□□ -0.74
CCDC171-208ENST00000486641 A0A096LPI6 279 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 HMX3A6NHT5 357 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CDK2AP1O14519 115 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MAFKO60675 156 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MRPS14O60783 128 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 WBP4O75554 376 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RECQL5O94762 991 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MMP10P09238 476 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF37AP17032 561 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 EFNA1P20827 205 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 C21orf33P30042 268 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CHRNA5P30532 468 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 OR3A3P47888 321 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 AGTR2P50052 363 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 WNT3AP56704 352 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 KCTD2Q14681 263 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ZBTB6Q15916 424 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 PARP15Q460N3 678 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CDONQ4KMG0 1287 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SPANXN2Q5MJ10 180 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CPZQ66K79 652 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SHQ1Q6PI26 577 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 TRAF7Q6Q0C0 670 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CEP68Q76N32 757 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 GALNT7Q86SF2 657 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 GRAMD2AQ8IUY3 354 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CCDC71Q8IV32 467 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ARHGAP12Q8IWW6 846 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 OR8H2Q8N162 312 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ATPAF2Q8N5M1 289 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 LRRC52Q8N7C0 313 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 DCBLD1Q8N8Z6 715 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 TTC29Q8NA56 475 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NETO1Q8TDF5 533 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ESAMQ96AP7 390 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MAP6Q96JE9 813 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms