RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 FAM153AQ9UHL3 310 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 TUBD1Q9UJT1 453 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ANAPC2Q9UJX6 822 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CROTQ9UKG9 612 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 VANGL2Q9ULK5 521 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 POLHQ9Y253 713 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 SPO11Q9Y5K1 396 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 FADS3Q9Y5Q0 445 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 A0A1B0GVL5 298 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 IGLON5A6NGN9 336 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 STMND1H3BQB6 276 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 RAD51BO15315 384 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 SLC16A3O15427 465 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 MED7O43513 233 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 SNAP91O60641 907 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ULK1O75385 1050 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 GCATO75600 419 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 POP4O95707 220 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 RPLP0P05388 317 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 GLI1P08151 1106 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CTSEP14091 401 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 HGFP14210 728 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 PFKFB1P16118 471 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 TSHRP16473 764 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 TNFSF4P23510 183 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CMA1P23946 247 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 IDUAP35475 653 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CASRP41180 1078 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 SCNN1BP51168 640 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 NR1H2P55055 460 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CCL7P80098 99 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 FKBP3Q00688 224 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 SRSF6Q13247 344 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 KLF1Q13351 362 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 EIF4EBP2Q13542 120 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 FGL2Q14314 439 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 NCAPHQ15003 741 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 TOR1AIP1Q5JTV8 583 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 EFHC1Q5JVL4 640 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 FOXB2Q5VYV0 432 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 KANK2Q63ZY3 851 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 PGM2L1Q6PCE3 622 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 BORAQ6PGQ7 559 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ZYG11AQ6WRX3 759 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 DPY19L3Q6ZPD9 716 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 TAOK1Q7L7X3 1001 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 B3GNT8Q7Z7M8 397 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 SETD3Q86TU7 594 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 VASH2Q86V25 355 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 SYTL1Q8IYJ3 562 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 C10orf53Q8N6V4 93 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 PCDH20Q8N6Y1 951 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 DCAF4L2Q8NA75 395 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CEP70Q8NHQ1 597 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ADAMTS15Q8TE58 950 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 HRASLS5Q96KN8 279 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 EXOC2Q96KP1 924 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 RHOVQ96L33 236 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 KLF6Q99612 283 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CMKLR1Q99788 373 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ZSWIM1Q9BR11 485 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 FUCA2Q9BTY2 467 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 LRRC61Q9BV99 259 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 C1QTNF7Q9BXJ2 289 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CPEB1Q9BZB8 566 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 NUP62CLQ9H1M0 184 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 LRRN3Q9H3W5 708 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 XKR8Q9H6D3 395 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 IARS2Q9NSE4 1012 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 FKBP14Q9NWM8 211 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ARMCX3Q9UH62 379 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 IL19Q9UHD0 177 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 VPS51Q9UID3 782 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 RCOR1Q9UKL0 485 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CNOT6Q9ULM6 557 aaKnown RBP6.74□□□□□ -1.33
HDAC3-209ENST00000486618 MAN2B2Q9Y2E5 1009 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 LOXL2Q9Y4K0 774 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 CAPN7Q9Y6W3 813 aa6.74□□□□□ -1.33
HDAC3-209ENST00000486618 ARHGEF17Q96PE2 2063 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 BOD1L1Q8NFC6 3051 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ZFC3H1O60293 1989 aaKnown RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PRAMEF33A0A0G2JMD5 474 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 A0A1W2PQM1 296 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CLEC18AA5D8T8 446 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 ENO4A6NNW6 628 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 GPR89AB7ZAQ6 455 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 E5RJQ4 531 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 K7ERQ8 282 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 SMAD6O43541 496 aaKnown RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PRAMEF10O60809 474 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 DNAJC8O75937 253 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 LRIG2O94898 1065 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PGM3O95394 542 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PF4P02776 101 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 GPR89BP0CG08 455 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 PORP16435 677 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-209ENST00000486618 FUT4P22083 530 aa6.73□□□□□ -1.33
HDAC3-209ENST00000486618 CTNNA2P26232 953 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms