RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 DNPEPQ9ULA0 475 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 PLEKHA6Q9Y2H5 1048 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 C17orf113A0A1B0GUU1 675 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 NKX2-6A6NCS4 301 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 BTN3A1O00481 513 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 OR2B3O76000 313 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 RASAL1O95294 804 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 CELA2AP08217 269 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 HBQ1P09105 142 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 PPP1R2P41236 205 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 FOLH1Q04609 750 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 TFF3Q07654 80 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 DMPKQ09013 629 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 TMEM115Q12893 351 aaPredicted RBP14.64□□□□□ -0.07
U2AF1-211ENST00000486519 TUBB8Q3ZCM7 444 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 AMZ2Q86W34 360 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 PHF13Q86YI8 300 aaPredicted RBP14.64□□□□□ -0.07
U2AF1-211ENST00000486519 DTWD1Q8N5C7 304 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 BEND7Q8N7W2 519 aaPredicted RBP14.64□□□□□ -0.07
U2AF1-211ENST00000486519 RASGEF1AQ8N9B8 481 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 DNAAF3Q8N9W5 541 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 CCDC34Q96HJ3 373 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 DMRTA2Q96SC8 542 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 C17orf62Q9BQA9 187 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 ZNF559Q9BR84 538 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 ZSCAN5AQ9BUG6 496 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 SOX17Q9H6I2 414 aaPredicted RBP14.64□□□□□ -0.07
U2AF1-211ENST00000486519 ZNF160Q9HCG1 818 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 SYTL2Q9HCH5 934 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 ST6GALNAC2Q9UJ37 374 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 ADAM21Q9UKJ8 722 aa14.64□□□□□ -0.07
U2AF1-211ENST00000486519 RGSL1A5PLK6 1076 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 PRAMEF2O60811 474 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 MMP2P08253 660 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 UCHL3P15374 230 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 UGT1A4P22310 534 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 MEOX1P50221 254 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 DCDC1P59894 354 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 CLEC16AQ2KHT3 1053 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 ATP13A5Q4VNC0 1218 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 ALG1LQ6GMV1 187 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 CLEC9AQ6UXN8 241 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 SPPL2CQ8IUH8 684 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 CHERPQ8IWX8 916 aaKnown RBP14.63□□□□□ -0.07
U2AF1-211ENST00000486519 BBS5Q8N3I7 341 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 LILRA3Q8N6C8 439 aaPredicted RBP14.63□□□□□ -0.07
U2AF1-211ENST00000486519 SIRT6Q8N6T7 355 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 PROKR1Q8TCW9 393 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 CCHCR1Q8TD31 782 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 BRIX1Q8TDN6 353 aaKnown RBP14.63□□□□□ -0.07
U2AF1-211ENST00000486519 AGAP11Q8TF27 550 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 CA5BP1Q8WTZ4 195 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 NINJ1Q92982 152 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 MAGED4Q96JG8 741 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 RMDN2Q96LZ7 410 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 AP1M1Q9BXS5 423 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 UCK2Q9BZX2 261 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 POLR1EQ9GZS1 481 aaKnown RBP14.63□□□□□ -0.07
U2AF1-211ENST00000486519 GPAMQ9HCL2 828 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 FAM8A1Q9UBU6 413 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 TTLL3Q9Y4R7 772 aa14.63□□□□□ -0.07
U2AF1-211ENST00000486519 OR2AG2A6NM03 316 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 ANKRD66B4E2M5 251 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 PROM1O43490 865 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 WDPCPO95876 746 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 CRYABP02511 175 aaKnown RBP14.62□□□□□ -0.07
U2AF1-211ENST00000486519 HLA-DQB2P05538 268 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 TCF4P15884 667 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 VCLP18206 1134 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 PCSK6P29122 969 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 MTIF2P46199 727 aaKnown RBP14.62□□□□□ -0.07
U2AF1-211ENST00000486519 NSFP46459 744 aaKnown RBP14.62□□□□□ -0.07
U2AF1-211ENST00000486519 CDH6P55285 790 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 HSF1Q00613 529 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 NKG7Q16617 165 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 ZNF677Q86XU0 584 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 DMRTC2Q8IXT2 367 aaPredicted RBP14.62□□□□□ -0.07
U2AF1-211ENST00000486519 GPR135Q8IZ08 494 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 NUDT8Q8WV74 236 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 CPLX3Q8WVH0 158 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 ZFPM2Q8WW38 1151 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 C8orf44Q96CB5 159 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.62□□□□□ -0.07
U2AF1-211ENST00000486519 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 CTSFQ9UBX1 484 aa14.62□□□□□ -0.07
U2AF1-211ENST00000486519 DYTNA2CJ06 578 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 AURKAO14965 403 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 ZSCAN9O15535 394 aaPredicted RBP14.61□□□□□ -0.07
U2AF1-211ENST00000486519 MIPP30301 263 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 HCAR3P49019 387 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 KLK7P49862 253 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 ST13P50502 369 aaKnown RBP14.61□□□□□ -0.07
U2AF1-211ENST00000486519 METRNLQ641Q3 311 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 TMC3Q7Z5M5 1100 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 MARVELD2Q8N4S9 558 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 HAS2Q92819 552 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 STK33Q9BYT3 514 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 XKR8Q9H6D3 395 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 BPIFA1Q9NP55 256 aa14.61□□□□□ -0.07
U2AF1-211ENST00000486519 DNAJB12Q9NXW2 375 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms