RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 PDE10AQ9Y233 779 aa11.72□□□□□ -0.53
PKP4-213ENST00000486254 BTRCQ9Y297 605 aa11.72□□□□□ -0.53
PKP4-213ENST00000486254 TIMM22Q9Y584 194 aa11.72□□□□□ -0.53
PKP4-213ENST00000486254 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 FAM234BA2RU67 622 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 FADS2P1A8MWK0 482 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 LSM1O15116 133 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 ANGPT2O15123 496 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 SPINT1O43278 529 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 MAP3K7O43318 606 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 PEX1O43933 1283 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ATG13O75143 517 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 PSIP1O75475 530 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 HIST1H2AGP0C0S8 130 aaPredicted RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 HSD17B1P14061 328 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ITGB6P18564 788 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 HIST1H2ADP20671 130 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 JAK1P23458 1154 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 PRPH2P23942 346 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 HMOX2P30519 316 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ETV3P41162 512 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ENPP2Q13822 863 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 BOP1Q14137 746 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 TRIM25Q14258 630 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 RPS6KA2Q15349 733 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 SHHQ15465 462 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ZNF658BQ4V348 819 aaPredicted RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 PAOXQ6QHF9 649 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 UBE2R2Q712K3 238 aaPredicted RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 DPP10Q8N608 796 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 C12orf76Q8N812 135 aaPredicted RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 L3MBTL4Q8NA19 623 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 OR9I1Q8NGQ6 314 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 OR2T11Q8NH01 316 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 MCOLN3Q8TDD5 553 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 NRG4Q8WWG1 115 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ATL1Q8WXF7 558 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 SCAMP4Q969E2 229 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 NXPE3Q969Y0 559 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 FBXL8Q96CD0 374 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 NAF1Q96HR8 494 aaKnown RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 HIST1H2AHQ96KK5 128 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ZNF184Q99676 751 aaPredicted RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 HIST1H2AJQ99878 128 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 H2AFJQ9BTM1 129 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 EBF3Q9H4W6 596 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ARL15Q9NXU5 204 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 THAP10Q9P2Z0 257 aaPredicted RBP11.71□□□□□ -0.53
PKP4-213ENST00000486254 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 ANGPTL3Q9Y5C1 460 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 PTGDR2Q9Y5Y4 395 aa11.71□□□□□ -0.53
PKP4-213ENST00000486254 CKAP5Q14008 2032 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 LRRK1Q38SD2 2015 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 C1QTNF3-AMACRE9PGA6 284 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 H3BNX3 289 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 FXYD1O00168 92 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 ARNTLO00327 626 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 RGS14O43566 566 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 SLC22A3O75751 556 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 KRT6AP02538 564 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 KRT6BP04259 564 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 C8BP07358 591 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 XRCC1P18887 633 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 CAPN3P20807 821 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 KRT6CP48668 564 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 KCNK10P57789 538 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 BNIP2Q12982 314 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 PRKG2Q13237 762 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 ZNF234Q14588 700 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 TAF11Q15544 211 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 MUM1Q2TAK8 710 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 TCHHL1Q5QJ38 904 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 GLB1L3Q8NCI6 653 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 SLC26A7Q8TE54 656 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 ATP6V1E2Q96A05 226 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 AP2M1Q96CW1 435 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 SPDL1Q96EA4 605 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 METTL2AQ96IZ6 378 aaKnown RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 LINC00615Q96LM1 132 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 PBX4Q9BYU1 374 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 CHD7Q9P2D1 2997 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 MSRAQ9UJ68 235 aa11.71□□□□□ -0.54
PKP4-213ENST00000486254 LEF1Q9UJU2 399 aaPredicted RBP11.71□□□□□ -0.54
PKP4-213ENST00000486254 SLC5A10A0PJK1 596 aa11.7□□□□□ -0.54
PKP4-213ENST00000486254 NR5A2O00482 541 aa11.7□□□□□ -0.54
PKP4-213ENST00000486254 KPNA3O00505 521 aaPredicted RBP11.7□□□□□ -0.54
PKP4-213ENST00000486254 LIN7AO14910 233 aaPredicted RBP11.7□□□□□ -0.54
PKP4-213ENST00000486254 ANKRD28O15084 1053 aa11.7□□□□□ -0.54
PKP4-213ENST00000486254 AP1G1O43747 822 aa11.7□□□□□ -0.54
PKP4-213ENST00000486254 SYNCRIPO60506 623 aaKnown RBP11.7□□□□□ -0.54
PKP4-213ENST00000486254 DNAJA2O60884 412 aa11.7□□□□□ -0.54
PKP4-213ENST00000486254 CLDN9O95484 217 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms