RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TTI2Q6NXR4 508 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 KIRREL2Q6UWL6 708 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 LRRTM4Q86VH4 590 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 SPPL2CQ8IUH8 684 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 FAM71AQ8IYT1 594 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 CA5BP1Q8WTZ4 195 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 CPA5Q8WXQ8 436 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 SDCCAG3Q96C92 435 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 THOC3Q96J01 351 aaKnown RBP7.97□□□□□ -1.13
XRN1-212ENST00000486211 ZNF599Q96NL3 588 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 UCN2Q96RP3 112 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 DMRTA2Q96SC8 542 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 TRIM39Q9HCM9 518 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 SLC22A11Q9NSA0 550 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 PLA2G3Q9NZ20 509 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 PLEKHA6Q9Y2H5 1048 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 HS3ST3B1Q9Y662 390 aa7.97□□□□□ -1.13
XRN1-212ENST00000486211 INTS1Q8N201 2190 aaKnown RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 SERTM1A2A2V5 107 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 OR6C74A6NCV1 312 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 DFFAO00273 331 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 PRAMEF2O60811 474 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 RASAL1O95294 804 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 LSM8O95777 96 aaKnown RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 CD63P08962 238 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 FAM157BP0CG42 384 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 IDSP22304 550 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 HTR7P34969 479 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 PREPP48147 710 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 TPI1P60174 286 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 MAXP61244 160 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 DCDP81605 110 aaKnown RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 SLC9A5Q14940 896 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 KHDC1Q4VXA5 237 aaKnown RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 RALGPS1Q5JS13 557 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 NAA35Q5VZE5 725 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 CES4AQ5XG92 561 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 RHBDD2Q6NTF9 364 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 OOSP2Q86WS3 158 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 PHC2Q8IXK0 858 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 DNAAF3Q8N9W5 541 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 ANKRD20A12PQ8NF67 263 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 THAP3Q8WTV1 239 aaPredicted RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 FOXD4L4Q8WXT5 416 aaPredicted RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 PSMF1Q92530 271 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 HAS2Q92819 552 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 MBD6Q96DN6 1003 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 LYSMD1Q96S90 227 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 SLC7A5P2Q9GIP4 190 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 FAM83DQ9H4H8 585 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 SIX2Q9NPC8 291 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 C1GALT1Q9NS00 363 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 IFT80Q9P2H3 777 aaPredicted RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 NDOR1Q9UHB4 597 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 GPN3Q9UHW5 284 aaPredicted RBP7.96□□□□□ -1.14
XRN1-212ENST00000486211 SERTAD3Q9UJW9 196 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 POMT2Q9UKY4 750 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.96□□□□□ -1.14
XRN1-212ENST00000486211 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.14
XRN1-212ENST00000486211 C17orf113A0A1B0GUU1 675 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 MTX2O75431 263 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 CTAG2O75638 210 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 TOXO94900 526 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 ZRANB2O95218 330 aaKnown RBP eCLIP7.95□□□□□ -1.14
XRN1-212ENST00000486211 SLC25A14O95258 325 aaPredicted RBP7.95□□□□□ -1.14
XRN1-212ENST00000486211 PRLP01236 227 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 NEFLP07196 543 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 HOXD4P09016 255 aaPredicted RBP7.95□□□□□ -1.14
XRN1-212ENST00000486211 ST6GAL1P15907 406 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 MMP8P22894 467 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 DNASE1P24855 282 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 LMAN1P49257 510 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 PMP22Q01453 160 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 CACNG1Q06432 222 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 PNOCQ13519 176 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 DOC2BQ14184 412 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 GALNT3Q14435 633 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 NKAIN1Q4KMZ8 207 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 TAF3Q5VWG9 929 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 ATL3Q6DD88 541 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 CDHR3Q6ZTQ4 885 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 CHERPQ8IWX8 916 aaKnown RBP7.95□□□□□ -1.14
XRN1-212ENST00000486211 OR11G2Q8NGC1 345 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 PROKR1Q8TCW9 393 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 EID2BQ96D98 161 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 MAGED4Q96JG8 741 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 MESP1Q9BRJ9 268 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 AP1M1Q9BXS5 423 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 PITPNM3Q9BZ71 974 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 PDCL3Q9H2J4 239 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 GOLPH3LQ9H4A5 285 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 RMND1Q9NWS8 449 aa7.95□□□□□ -1.14
XRN1-212ENST00000486211 GPC6Q9Y625 555 aaPredicted RBP7.95□□□□□ -1.14
XRN1-212ENST00000486211 DYTNA2CJ06 578 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 RGSL1A5PLK6 1076 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 NKX2-6A6NCS4 301 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 E9PLN8 166 aa7.94□□□□□ -1.14
XRN1-212ENST00000486211 CCP110O43303 1012 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms