RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 LIN7AO14910 233 aaPredicted RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 CD3EAPO15446 510 aaKnown RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 AVILO75366 819 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 PRKAR1AP10644 381 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 PSMA3P25788 255 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 PPARGP37231 505 aaPredicted RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 HSPA14Q0VDF9 509 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 RPA4Q13156 261 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 IL11RAQ14626 422 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 C16orf46Q6P387 395 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 CASC4Q6P4E1 433 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 REXO1L1PQ8IX06 675 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 OR5AR1Q8NGP9 310 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 CFAP61Q8NHU2 1237 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 SPRY4Q9C004 299 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 SEMA4CQ9C0C4 833 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 IL22Q9GZX6 179 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 EIF2B3Q9NR50 452 aaKnown RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 SYBUQ9NX95 663 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 MARCH4Q9P2E8 410 aaPredicted RBP17.17■□□□□ 0.34
COL6A1-204ENST00000486023 RARRES3Q9UL19 164 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 RIMKLBQ9ULI2 386 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 PLAGL1Q9UM63 463 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 ATMQ13315 3056 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 KALRNO60229 2985 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 TLCD2A6NGC4 264 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 SLC9B1P1A6NJY1 282 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 GOLGA8KD6RF30 607 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 GOLGA8TH3BQL2 631 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 BTN3A3O00478 584 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 NKX2-8O15522 239 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 KIF5CO60282 957 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 KATNA1O75449 491 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 NTRK1P04629 796 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 CD151P48509 253 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 HSD11B2P80365 405 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 SARNPP82979 210 aaKnown RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 ACVR1Q04771 509 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 GPR19Q15760 415 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 TBR1Q16650 682 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 ZNF658BQ4V348 819 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 TMTC4Q5T4D3 741 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 PTRHD1Q6GMV3 140 aaKnown RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 LRRC8BQ6P9F7 803 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 PACS1Q6VY07 963 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 AMIGO1Q86WK6 493 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 KRT222Q8N1A0 295 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 ESX1Q8N693 406 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 LSM14AQ8ND56 463 aaKnown RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 COG1Q8WTW3 980 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 TRIT1Q9H3H1 467 aaKnown RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 MVB12BQ9H7P6 319 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 FGF21Q9NSA1 209 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 IL17BQ9UHF5 180 aa17.16■□□□□ 0.34
COL6A1-204ENST00000486023 TMEM184BQ9Y519 407 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 MRPS18BQ9Y676 258 aaKnown RBP17.16■□□□□ 0.34
COL6A1-204ENST00000486023 SDK2Q58EX2 2172 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 PIEZO2Q9H5I5 2752 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 F8W8V4 182 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 AP3B1O00203 1094 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 BTN3A1O00481 513 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 NDUFS3O75489 264 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 C1QL1O75973 258 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 VAPBO95292 243 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 TIAF1O95411 115 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 ZBTB11O95625 1053 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-204ENST00000486023 DLGAP3O95886 979 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 GSTM1P09488 218 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 FAM87AP0C7U9 286 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 FGF5P12034 268 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 DLSTP36957 453 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 COILP38432 576 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-204ENST00000486023 GSTM4Q03013 218 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 ACY1Q03154 408 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 ABRQ12979 859 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 LINC00303Q3SY05 128 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 AARS2Q5JTZ9 985 aaKnown RBP17.15■□□□□ 0.34
COL6A1-204ENST00000486023 PWWP2BQ6NUJ5 590 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 CCDC137Q6PK04 289 aaKnown RBP17.15■□□□□ 0.34
COL6A1-204ENST00000486023 HOOK3Q86VS8 718 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 RASGEF1CQ8N431 466 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 MFSD3Q96ES6 412 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 SLC41A2Q96JW4 573 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 OSBPL9Q96SU4 736 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 NAP1L3Q99457 506 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-204ENST00000486023 CD180Q99467 661 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 TSSK1BQ9BXA7 367 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 CIDEBQ9UHD4 219 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 RPS6KL1Q9Y6S9 549 aa17.15■□□□□ 0.34
COL6A1-204ENST00000486023 ZNF106Q9H2Y7 1883 aaKnown RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 BHMG1C9JSJ3 638 aaPredicted RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 PGRMC1O00264 195 aaKnown RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 ZNF185O15231 689 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 TPSB2P20231 275 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms