RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RORAP35398 523 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 HADHAP40939 763 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 UQCRFS1P47985 274 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 LMAN1P49257 510 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 PGDP52209 483 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 GSDMDP57764 484 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 NADK2Q4G0N4 442 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 ZNF658BQ4V348 819 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-205ENST00000485397 ZNF789Q5FWF6 425 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 ADAMTS17Q8TE56 1095 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 HEXDCQ8WVB3 486 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 CPT1BQ92523 772 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 CLIP3Q96DZ5 547 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 DNAJC1Q96KC8 554 aaKnown RBP18.68■□□□□ 0.58
COL27A1-205ENST00000485397 TRIM5Q9C035 493 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 KLHL25Q9H0H3 589 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 FANCEQ9HB96 536 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 ARNT2Q9HBZ2 717 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 MLXIPLQ9NP71 852 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 ZDHHC3Q9NYG2 299 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 SNX7Q9UNH6 387 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 PCDHGA9Q9Y5G4 932 aaKnown RBP18.68■□□□□ 0.58
COL27A1-205ENST00000485397 DUSP10Q9Y6W6 482 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 COL12A1Q99715 3063 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 LRRK2Q5S007 2527 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 BLACEA4D250 179 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 RAB40ALP0C0E4 278 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 PVRP15151 417 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 PTPN7P35236 360 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 CYLC1P35663 651 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-205ENST00000485397 PREPP48147 710 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 ZRANB3Q5FWF4 1079 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 SERPINA9Q86WD7 417 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 OR52E1Q8NGJ3 308 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 XKR8Q9H6D3 395 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 ACTR5Q9H9F9 607 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-205ENST00000485397 PCMTD2Q9NV79 361 aa18.67■□□□□ 0.58
COL27A1-205ENST00000485397 IGLV3-16A0A075B6K0 115 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 TRBV5-4A0A0C4DH59 114 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 MATN2O00339 956 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 IFRD1O00458 451 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-205ENST00000485397 CAPN1P07384 714 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 TPH1P17752 444 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 NAP1L1P55209 391 aaKnown RBP18.66■□□□□ 0.58
COL27A1-205ENST00000485397 RWDD2BP57060 319 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 PRKG2Q13237 762 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 PTCHD3Q3KNS1 767 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 GPR33Q49SQ1 333 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 SARM1Q6SZW1 724 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 FAM198BQ6UWH4 519 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 TAS2R42Q7RTR8 314 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 KLHDC8BQ8IXV7 354 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 SYTL1Q8IYJ3 562 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 CLDN19Q8N6F1 224 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 CPT1CQ8TCG5 803 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 ALG3Q92685 438 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 PSMG3-AS1Q96PY0 264 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 TRAPPC9Q96Q05 1148 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 C19orf43Q9BQ61 176 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 NLNQ9BYT8 704 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 PITPNM3Q9BZ71 974 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 TFB2MQ9H5Q4 396 aaKnown RBP18.66■□□□□ 0.58
COL27A1-205ENST00000485397 LUC7LQ9NQ29 371 aaKnown RBP18.66■□□□□ 0.58
COL27A1-205ENST00000485397 FEZ2Q9UHY8 353 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-205ENST00000485397 TCFL5Q9UL49 500 aa18.66■□□□□ 0.58
COL27A1-205ENST00000485397 SOWAHDA6NJG2 315 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 VPS4BO75351 444 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 TMEM63AO94886 807 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 CYP2A7P20853 494 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 GNLYP22749 145 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 ACRV1P26436 265 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 CD151P48509 253 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 PAPD7Q5XG87 772 aaKnown RBP18.65■□□□□ 0.58
COL27A1-205ENST00000485397 AMIGO1Q86WK6 493 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 ADGRF3Q8IZF5 1079 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 EFCAB3Q8N7B9 438 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 TFGQ92734 400 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-205ENST00000485397 HGH1Q9BTY7 390 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 MVB12BQ9H7P6 319 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 SYTL2Q9HCH5 934 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 ACTR10Q9NZ32 417 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 VPS4AQ9UN37 437 aa18.65■□□□□ 0.58
COL27A1-205ENST00000485397 EPN1Q9Y6I3 576 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-205ENST00000485397 SPENQ96T58 3664 aaKnown RBP18.64■□□□□ 0.58
COL27A1-205ENST00000485397 TJP3O95049 919 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 METTL18O95568 372 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 ITGA1P56199 1179 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 BOP1Q14137 746 aaKnown RBP18.64■□□□□ 0.57
COL27A1-205ENST00000485397 DBN1Q16643 649 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 KCTD11Q693B1 232 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 CDHR3Q6ZTQ4 885 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 PIANPQ8IYJ0 282 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 ZBTB2Q8N680 514 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 FDCSPQ8NFU4 85 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 CDKN2AIPNLQ96HQ2 116 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 PPP1R2P1Q96PQ5 205 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 SLC7A5P2Q9GIP4 190 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 VPS37BQ9H9H4 285 aa18.64■□□□□ 0.57
COL27A1-205ENST00000485397 NLE1Q9NVX2 485 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-205ENST00000485397 PIH1D1Q9NWS0 290 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms